LOCUS BC026283 1201 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens apolipoprotein H (beta-2-glycoprotein I), mRNA (cDNA
clone MGC:23898 IMAGE:4734357), complete cds.
ACCESSION BC026283
VERSION BC026283.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1201)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1201)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1201
/db_xref="H-InvDB:HIT000040179"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23898 IMAGE:4734357"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1201
/gene="APOH"
/gene_synonym="BG"
/db_xref="GeneID:350"
/db_xref="HGNC:HGNC:616"
/db_xref="MIM:138700"
CDS 32..1069
/gene="APOH"
/gene_synonym="BG"
/codon_start=1
/product="apolipoprotein H (beta-2-glycoprotein I)"
/protein_id="AAH26283.1"
/db_xref="GeneID:350"
/db_xref="HGNC:HGNC:616"
/db_xref="MIM:138700"
/translation="MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYEPG
EEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTTFEY
PNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSA
GNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNY
PAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPSCKASCKVPVKKATVVYQ
GERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSSLAF
WKTDASDVKPC"
BASE COUNT 378 a 257 c 247 g 319 t
ORIGIN
1 actttggtag tgccagtgtg actcatccac aatgatttct ccagtgctca tcttgttctc
61 gagttttctc tgccatgttg ctattgcagg acggacctgt cccaagccag atgatttacc
121 attttccaca gtggtcccgt taaaaacatt ctatgagcca ggagaagaga ttacgtattc
181 ctgcaagccg ggctatgtgt cccgaggagg gatgagaaag tttatctgcc ctctcacagg
241 actgtggccc atcaacactc tgaaatgtac acccagagta tgtccttttg ctggaatctt
301 agaaaatgga gccgtacgct atacgacttt tgaatatccc aacacgatca gtttttcttg
361 taacactggg ttttatctga atggcgctga ttctgccaag tgcactgagg aaggaaaatg
421 gagcccggag cttcctgtct gtgctcccat catctgccct ccaccatcca tacctacgtt
481 tgcaacactt cgtgtttata agccatcagc tggaaacaat tccctctatc gggacacagc
541 agtttttgaa tgtttgccac aacatgcgat gtttggaaat gatacaatta cctgcacgac
601 acatggaaat tggactaaat taccagaatg cagggaagta aaatgcccat tcccatcaag
661 accagacaat ggatttgtga actatcctgc aaaaccaaca ctttattaca aggataaagc
721 cacatttggc tgccatgatg gatattctct ggatggcccg gaagaaatag aatgtaccaa
781 actgggaaac tggtctgcca tgccaagttg taaagcatct tgtaaagtac ctgtgaaaaa
841 agccactgtg gtgtaccaag gagagagagt aaagattcag gaaaaattta agaatggaat
901 gctacatggt gataaagttt ctttcttctg caaaaataag gaaaagaagt gtagctatac
961 agaggatgct cagtgtatag atggcactat cgaagtcccc aaatgcttca aggaacacag
1021 ttctctggct ttttggaaaa ctgatgcatc cgatgtaaag ccatgctaag gtggttttca
1081 gattccacac aaaatgtcac acttgtttct tgttcatcca aggaacctaa ttgaaattta
1141 aaaataaagc tactgaattt attgccgcac caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 a
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