LOCUS BC026213 4395 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens F-box and WD repeat domain containing 11, mRNA (cDNA
clone MGC:21122 IMAGE:4419029), complete cds.
ACCESSION BC026213
VERSION BC026213.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4395)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4395)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48928049.
FEATURES Location/Qualifiers
source 1..4395
/db_xref="H-InvDB:HIT000040144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21122 IMAGE:4419029"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4395
/gene="FBXW11"
/gene_synonym="BTRC2"
/gene_synonym="BTRCP2"
/gene_synonym="Fbw11"
/gene_synonym="FBW1B"
/gene_synonym="Hos"
/db_xref="GeneID:23291"
/db_xref="HGNC:HGNC:13607"
/db_xref="MIM:605651"
CDS 372..1961
/gene="FBXW11"
/gene_synonym="BTRC2"
/gene_synonym="BTRCP2"
/gene_synonym="Fbw11"
/gene_synonym="FBW1B"
/gene_synonym="Hos"
/codon_start=1
/product="F-box and WD repeat domain containing 11"
/protein_id="AAH26213.1"
/db_xref="GeneID:23291"
/db_xref="HGNC:HGNC:13607"
/db_xref="MIM:605651"
/translation="MEPDSVIEDKTIELMNTSVMEDQNEDESPKKNTLWQISNGTSSV
IVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPML
QRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVR
TDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQ
RIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD
ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM
ASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG
IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDG
KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN
VPPSAQNETRSPSRTYTYISR"
BASE COUNT 1131 a 928 c 1039 g 1297 t
ORIGIN
1 gtagtcgtgg cgctctcgag gccctgccat gagcaagctc ttaactcttc aggtctgcac
61 gtcctacgcc caccgtccag tgctactctc agctcggagt tcagcttcgg gctgccaaga
121 gccagcaacc tggtgtcaga ggctcggtcc cacaacgctc tgcgggccgc ggcgcctgct
181 gggaggtgta gtccccgatc tgcgtactgc gttcgccgag ggggagggcg gagctgccgg
241 cggcccgggc gggctggcag ctagagtggg tgcgatagcc gcctccgcct ctgccgcctc
301 cgccgtcgcc tcctccgccc gggccgttcg ctgctgcgcg gggagagcga ggcggggccg
361 ccggggccgc catggagccc gactcggtga ttgaggacaa gaccatcgag ctcatgaaca
421 cttcagttat ggaagatcaa aatgaagatg agtccccaaa gaaaaatact ctttggcaga
481 taagtaatgg aacatcatct gtgatcgtct ccagaaagag gccatcagaa ggaaactatc
541 aaaaagaaaa agacttgtgt attaaatatt ttgaccagtg gtctgaatca gatcaagtgg
601 aatttgtgga acatcttatt tcacgaatgt gtcattatca gcatggacat attaactctt
661 acctgaagcc catgttgcag cgggacttta ttaccgcttt accagagcaa ggcttagatc
721 acatagcaga aaacattctt tcgtacctgg atgccaggtc tctgtgtgca gcagagctgg
781 tatgtaaaga atggcagcga gtgatctcag aaggaatgct ttggaagaag ctgattgaac
841 gaatggtacg cactgatccc ctatggaaag gactttcaga aagaagaggg tgggatcagt
901 acctgtttaa aaacagaccc acagatggcc ctccaaattc attttatagg tcattatacc
961 caaagattat ccaggatata gagactatag aatctaactg gcggtgtgga cgacacaact
1021 tgcagaggat tcagtgccgc tctgaaaata gtaaaggtgt ctactgttta cagtacgatg
1081 atgaaaaaat tatcagtggc ctacgagata attctattaa gatatgggat aaaaccagcc
1141 tggaatgttt gaaagtgtta acaggacaca caggctctgt cctctgtctg cagtatgatg
1201 agcgtgtcat tgtaactggc tcttcagatt ctacggtgag agtgtgggat gtgaacacgg
1261 gtgaagttct taacacattg atccaccaca atgaggctgt attgcactta cgcttcagca
1321 atggactgat ggtgacctgt tccaaggacc gctccattgc tgtgtgggac atggcttctg
1381 cgaccgacat cactttacgc cgtgtcctgg ttggccaccg ggctgccgtc aatgtagtag
1441 actttgacga caagtacatc gtgtctgcct ctggtgacag gaccatcaaa gtctggagca
1501 cgagcacctg tgaatttgtt cgtactctca atgggcacaa gcggggcatt gcctgtctcc
1561 agtacaggga tcgcctggtt gttagtggat catcagataa taccattagg ctctgggata
1621 ttgaatgtgg tgcctgttta agagtcctag agggacatga agaattggtc cgatgcatcc
1681 ggtttgataa caagaggatt gtcagtgggg cctatgatgg gaaaattaaa gtttgggact
1741 tgcaagctgc tcttgaccct cgagccccag caagcacatt gtgtttgcgc acattggtgg
1801 aacattctgg acgtgtgttt cggctccagt ttgatgagtt tcagatcatc agcagctccc
1861 atgatgacac tattttgatt tgggatttct taaatgtgcc tcccagtgcc cagaatgaga
1921 cccgttctcc ctccagaaca tacacttaca tctctagata acagtctgca ctttcacccg
1981 tttcagggtt ttctagtctt gaactactgg ctacgtggct accaaatgcc taagggagtt
2041 cgttcacagc tgagttatga agctggaatt ggttctagac gctgggtaga tgcaaagcag
2101 cctaactctt caagtaccga catttctcac ctctgattcc ggctctcctt tgagaaggag
2161 accttagctt ccccggcttc aagtagaaca gaagcccgtt tccttccctc atcagtgaaa
2221 aaatctaatg tttcaaatgt aaattgttca tagaaaagga acatagaatc tgttttacag
2281 aagtaaatcg accgtcaaga gaagacttgg cctctaattt atattgcttt gcactttggt
2341 ttgatattaa gaaacagcat tcttcttcag tgaaattttg ggtgccaaac acctacccag
2401 aatgtccagg gctttcattt tcaaaagtta gcattctcct tttgaccgtc caagtcatta
2461 tgaattctga cttgttgtat taggaacatg ttggacagtg gaaaattttc tctggattgt
2521 tttagtaata tttttgggat tatacttcct ttctgtacca atttctttta atttaaagaa
2581 ctataagtca gttatattat ctaccaacag gtaatatagc tctttctttt attaactgtt
2641 ctctgtcccc caaccatctc ctgatatttg gtagagtaac acctttatac gtgtgcttgc
2701 ctcctaattt aaaatactgt attcgcatgt agatataatg tacataacag tttaacctca
2761 aagttgctgg agtcagggcc ccctgtgctt gagacactaa tacagagtgt gttcgcactt
2821 agccatgggc tgggctcaag aacctgatac ctgggttgat gtggattacc tagaaccctt
2881 cctgcagtat tcatacagtg tttttatttt gttgttgtca ttgcgtgtgt gtggtttgtg
2941 tgtgttttta atgagaatct tgttttaaaa tgtaatttct aaggtttaac accaaaatgt
3001 tttatttgtt gtggagtata tattatacaa tagagaggta ccttaaacat tttttgttct
3061 tattcttttt ctcataagta ctcctgagta caagtggtca cctcccatag tattcatttg
3121 gcttcgctgt caaaaatcat tattctgtgc agtcgtggcc ctgggaaggg gaaataagaa
3181 ggccctgttg acgggctgtc ttggctctgg aattcatgca tcctggcctt gccaaggttc
3241 tggcagggcc tgctggtgtg ttggagcctg cagggcaggt caggctggtt cagaggccca
3301 tgctgagggg tgggtgctct gaagtggagt gaagcctcaa gcccatgaat gccaccccag
3361 tcatctctgg tgtcagctgc tgctgtggcc ccagcaggtt ctcaaagctc ccaagtcctc
3421 cctacgacac agcccaaatg tgtaaatggc actgttgccc tgacagtgca tggaaaggac
3481 gttggcatcc aattggcact ccttctccct tattcaatat taggtttgat ttgcccttcg
3541 ccattgtttc caaagatcaa ggaatgtcaa taacatttta aaggaccaat aaacagcctc
3601 ctataaagta aacctcttcc cgtggaagca cactctacta ctaaagggaa ggcccctggg
3661 ctctgatttg tcctttgcat tgagaacggt gtggggatca gtgtgtgtgt atgtgatttg
3721 tttattgagt tggctttgct tttttagttt ttcttttaaa aataaaatcc ttccttccca
3781 tgttactaaa ttaatttatg tttttgagag gttgagtctc aaagtgtaaa caataaacct
3841 ccattcataa ggtggatgtt gtaagcttga tggtggttgt gaaagtgatt tagctttgac
3901 cacttttcat cctacagctt caatatcaaa ctggttagga aagcccaggg ggaagggagg
3961 gggcagggga ggaggcaatt ctgaatgaat gaatggattt tttgttgttt ttgcatgttt
4021 aatatagaag ttcccctcgt tccttgggag atgatggcct ttgaatatgc agacaacctt
4081 tgaattgtgc ctactaaatt atagcagggg actttggcac ccaaggagtt ctgactttct
4141 gggattataa tagtaattcc cagccatact ctggacttta ttttgctaac cataactgag
4201 caaatgtaaa ttactgctat attaatgttt taaagcactg ggatagtcta attctaactt
4261 gtaattaatt atgtttgcca attatctgtt tgaaataaat ttgtgtctga acagctattg
4321 aaactgttaa attgtacaga tattattcat gacagctttg tactgtggaa tgtgcttaat
4381 aaaaaaaaaa aaaaa
//