LOCUS BC026196 2745 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens aconitase 2, mitochondrial, mRNA (cDNA clone MGC:33908
IMAGE:5264179), complete cds.
ACCESSION BC026196
VERSION BC026196.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2745)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2745)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC026196.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2745
/db_xref="H-InvDB:HIT000040142"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33908 IMAGE:5264179"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2745
/gene="ACO2"
/gene_synonym="aconitase"
/gene_synonym="ACONM"
/gene_synonym="MGC20605"
/gene_synonym="MGC33908"
/db_xref="GeneID:50"
/db_xref="HGNC:HGNC:118"
/db_xref="MIM:100850"
CDS 26..2368
/gene="ACO2"
/gene_synonym="aconitase"
/gene_synonym="ACONM"
/gene_synonym="MGC20605"
/gene_synonym="MGC33908"
/codon_start=1
/product="aconitase 2, mitochondrial"
/protein_id="AAH26196.1"
/db_xref="GeneID:50"
/db_xref="HGNC:HGNC:118"
/db_xref="MIM:100850"
/translation="MAPYSLLVTRLQKALGVRQYHVASVLCQRAKVAMSHFEPNEYIH
YDLLEKNINIVRKRLNRPLTLSEKIVYGHLDDPASQEIERGKSYLRLRPDRVAMQDAT
AQMAMLQFISSGLSKVAVPSTIHCDHLIEAQVGGEKDLRRAKDINQEVYNFLATAGAK
YGVGFWKPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIRVGGADAVDVMA
GIPWELKCPKVIGVKLTGSLSGWSSPKDVILKVAGILTVKGGTGAIVEYHGHGVDSIS
CTGMATICNMGAEIGATTSVFPYNHRMKKYLSKTGREDIANLADEFKDHLVPDPGCHY
DQLIEINLSELKPHINGPFTPDLAHPVAEVGKVAEKEGWPLDIRVGLIGSCTNSSYED
MGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQILRDLGGIVLANACGP
CIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFN
PETDYLTGTDGKKFRLEAPDADELPKGEFDPGQDTYQHPPKDSSGQHVDVSPTSQRLQ
LLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINI
ENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLG
GRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFTPGKPLKC
IIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKELQQ"
BASE COUNT 661 a 776 c 753 g 555 t
ORIGIN
1 gtcctcatct ttgtcagtgc acaaaatggc gccctacagc ctactggtga ctcggctgca
61 gaaagctctg ggtgtgcggc agtaccatgt ggcctcagtc ctgtgccaac gggccaaggt
121 ggcgatgagc cactttgagc ccaacgagta catccattat gacctgctag agaagaacat
181 taacattgtt cgcaaacgac tgaaccggcc gctgacactc tcggagaaga ttgtgtatgg
241 acacctggat gaccccgcca gccaggaaat tgagcgaggc aagtcgtacc tgcggctgcg
301 gccggaccgt gtggccatgc aggatgcgac ggcccagatg gccatgctcc agttcatcag
361 cagcgggctg tccaaggtgg ctgtgccatc caccatccac tgtgaccatc tgattgaagc
421 ccaggttggg ggcgagaaag acctgcgccg ggccaaggac atcaaccagg aagtttataa
481 tttcctggca actgcaggtg ccaaatatgg cgtgggcttc tggaagcctg gatctggaat
541 cattcaccag attattctgg aaaactatgc gtaccctggt gttcttctga ttggcactga
601 ctcccacacc cccaatggtg gcggccttgg gggcatctgc attcgagttg ggggtgccga
661 tgctgtggat gtcatggctg ggatcccctg ggagttgaag tgccccaagg tgattggcgt
721 gaagctgacg ggctctctct ccggttggtc ctcacccaaa gatgtgatcc tgaaggtggc
781 aggcatcctc acggtgaaag gtggcacagg tgcaatcgtg gaataccacg ggcatggtgt
841 agactccatc tcctgcactg gcatggcgac aatctgcaac atgggtgcag aaattggggc
901 caccacttcc gtgttccctt acaaccacag gatgaagaag tacctgagca agaccggccg
961 ggaagacatt gccaatctag ctgatgaatt caaggatcac ttggtgcctg accctggctg
1021 ccattatgac caactaattg aaattaacct cagtgagctg aagccacaca tcaatgggcc
1081 cttcacccct gacctggctc accctgtggc agaagtgggc aaggtggcag agaaggaagg
1141 atggcctctg gacatccgag tgggtctaat tggtagctgc accaattcaa gctatgaaga
1201 tatggggcgc tcagcagctg tggccaagca ggcactggcc catggcctca agtgcaagtc
1261 ccagttcacc atcactccag gttccgagca gatccgcgcc accattgagc gggacggcta
1321 tgcacagatc ttgagggatc tgggtggcat tgtcctggcc aatgcttgtg gcccctgcat
1381 tggccagtgg gacaggaagg acatcaagaa gggggagaag aacacaatcg tcacctcgta
1441 caacaggaac ttcacgggcc gcaacgacgc aaaccccgag acccatgcct ttgtcacgtc
1501 cccagagatt gtcacagccc tggccattgc gggaaccctc aagttcaacc cagagaccga
1561 ctacctgacg ggcacggatg gcaagaagtt caggctggag gctccggatg cagatgagct
1621 tcccaaaggg gagtttgacc cagggcagga cacctaccag cacccaccca aggacagcag
1681 cgggcagcat gtggacgtga gccccaccag ccagcgcctg cagctcctgg agccttttga
1741 caagtgggat ggcaaggacc tggaggacct gcagatcctc atcaaggtca aagggaagtg
1801 taccactgac cacatctcag ctgctggccc ctggctcaag ttccgtgggc acttggataa
1861 catctccaac aacctgctca ttggtgccat caacattgaa aacggcaagg ccaactccgt
1921 gcgcaatgcc gtcactcagg agtttggccc cgtccctgac actgcccgct actacaagaa
1981 acatggcatc aggtgggtgg tgatcggaga cgagaactac ggcgagggct cgagccggga
2041 gcatgcagct ctggagcctc gccaccttgg gggccgggcc atcatcacca agagctttgc
2101 caggatccac gagaccaacc tgaagaaaca gggcctgctg cctctgacct tcgctgaccc
2161 ggctgactac aacaagattc accctgtgga caagctgacc attcagggcc tgaaggactt
2221 cacccctggc aagcccctga agtgcatcat caagcacccc aacgggaccc aggagaccat
2281 cctcctgaac cacaccttca acgagacgca gattgagtgg ttccgcgctg gcagtgccct
2341 caacagaatg aaggaactgc aacagtgagg gcagtgcctc cccgccccgc cgctggcgtc
2401 aagttcagct ccacgtgtgc catcagtgga tccgatccgt ccagccatgg cttcctattc
2461 caagatggtg tgaccagaca tgcttcctgc tccccgctta gcccacggag tgactgtggt
2521 tgtggtgggg gggttcttaa aataactttt tagcccccat cttcctattt tgagtttggt
2581 tcagatctta agcagctcca tgcaactgta tttatttttg atgacaagac tcccatctaa
2641 agtttttctc ctgcctgatc atttcattgg tggctgaagg attctagaga accttttgtt
2701 cttgcaagga aaacaagaat ccaaaaccaa aaaaaaaaaa aaaaa
//