LOCUS BC026015 1620 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein D (AU-rich
element RNA binding protein 1, 37kDa), mRNA (cDNA clone MGC:3882
IMAGE:2961272), complete cds.
ACCESSION BC026015
VERSION BC026015.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC026015.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51477710.
FEATURES Location/Qualifiers
source 1..1620
/db_xref="H-InvDB:HIT000040067"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3882 IMAGE:2961272"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1620
/gene="HNRPD"
/gene_synonym="AUF1A"
/gene_synonym="hnRNPD0"
/gene_synonym="P37"
/db_xref="GeneID:3184"
/db_xref="HGNC:HGNC:5036"
/db_xref="MIM:601324"
CDS 294..1214
/gene="HNRPD"
/gene_synonym="AUF1A"
/gene_synonym="hnRNPD0"
/gene_synonym="P37"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein D
(AU-rich element RNA binding protein 1, 37kDa)"
/protein_id="AAH26015.1"
/db_xref="GeneID:3184"
/db_xref="HGNC:HGNC:5036"
/db_xref="MIM:601324"
/translation="MSEEQFGGDGAAAAATAAVGGSAGEQEGAMVAATQGAAAAAGSG
AGTGGGTASGGTEGGSAESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIG
GLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH
KLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNK
TNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFA
GRARGRGGDQQSGYGKVSRRGGHQNSYKPY"
BASE COUNT 470 a 302 c 492 g 356 t
ORIGIN
1 cgcggcggcg ccattaaagc gaggaggagg cgagagcggc cgccgctggt gcttattctt
61 ttttagtgca gcgggagaga gcgggagtgt gcgccgcgcg agagtgggag gcgaaggggg
121 caggccaggg agaggcgcag gagcctttgc agccacgcgc gcgccttccc tgtcttgtgt
181 gcttcgcgag gtagagcggg cgcgcggcag cggcggggat tactttgctg ctagtttcgg
241 ttcgcggcag cggcgggtgt agtctcggcg gcagcggcgg agacactagc actatgtcgg
301 aggagcagtt cggcggggac ggggcggcgg cagcggcaac ggcggcggta ggcggctcgg
361 cgggcgagca ggagggagcc atggtggcgg cgacacaggg ggcagcggcg gcggcgggaa
421 gcggagccgg gaccgggggc ggaaccgcgt ctggaggcac cgaagggggc agcgccgagt
481 cggagggggc gaagattgac gccagtaaga acgaggagga tgaaggccat tcaaactcct
541 ccccacgaca ctctgaagca gcgacggcac agcgggaaga atggaaaatg tttataggag
601 gccttagctg ggacactaca aagaaagatc tgaaggacta cttttccaaa tttggtgaag
661 ttgtagactg cactctgaag ttagatccta tcacagggcg atcaaggggt tttggctttg
721 tgctatttaa agaatcggag agtgtagata aggtcatgga tcaaaaagaa cataaattga
781 atgggaaggt gattgatcct aaaagggcca aagccatgaa aacaaaagag ccggttaaaa
841 aaatttttgt tggtggcctt tctccagata cacctgaaga gaaaataagg gagtactttg
901 gtggttttgg tgaggtggaa tccatagagc tccccatgga caacaagacc aataagaggc
961 gtgggttctg ctttattacc tttaaggaag aagaaccagt gaagaagata atggaaaaga
1021 aataccacaa tgttggtctt agtaaatgtg aaataaaagt agccatgtcg aaggaacaat
1081 atcagcaaca gcaacagtgg ggatctagag gaggatttgc aggaagagct cgtggaagag
1141 gtggtgacca gcagagtggt tatgggaagg tatccaggcg aggtggtcat caaaatagct
1201 acaaaccata ctaaattatt ccatttgcaa cttatcccca acaggtggtg aagcagtatt
1261 ttccaatttg aagattcatt tgaaggtggc tcctgccacc tgctaatagc agttcaaact
1321 aaattttttg tatcaagtcc ctgaatggaa gtatgacgtt gggtccctct gaagtttaat
1381 tctgagttct cattaaaaga aatttgcttt cattgtttta tttcttaatt gctatgcttc
1441 agaatcaatt tgtgttttat gccctttccc ccagtattgt agagcaagtc ttgtgttaaa
1501 agcccagtgt gacagtgtca tgatgtagta gtgtcttact ggttttttaa taaatccttt
1561 tgtataaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//