LOCUS BC025991 1655 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens general transcription factor IIA, 1-like, mRNA (cDNA
clone MGC:26254 IMAGE:4826221), complete cds.
ACCESSION BC025991
VERSION BC025991.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1655)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1655)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26787967.
FEATURES Location/Qualifiers
source 1..1655
/db_xref="H-InvDB:HIT000040056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26254 IMAGE:4826221"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1655
/gene="GTF2A1L"
/gene_synonym="ALF"
/db_xref="GeneID:11036"
/db_xref="HGNC:HGNC:30727"
/db_xref="MIM:605358"
CDS 45..1481
/gene="GTF2A1L"
/gene_synonym="ALF"
/codon_start=1
/product="general transcription factor IIA, 1-like"
/protein_id="AAH25991.1"
/db_xref="GeneID:11036"
/db_xref="HGNC:HGNC:30727"
/db_xref="MIM:605358"
/translation="MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWE
TKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELG
TSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQ
QLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDIL
VSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHD
ESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDL
SIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSIS
NEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNK
WKFYLKDGVMCFGGRDYVFAKAIGDAEW"
BASE COUNT 528 a 310 c 357 g 460 t
ORIGIN
1 gtcgagagcg gaggcgcaaa gggccaggtg ctggaggtgc tgtcatggcc tgcctcaacc
61 cggtgcctaa actctacaga tctgtaattg aagatgtaat tgaaggagtt cggaatctat
121 ttgctgaaga aggtatagag gaacaagttt taaaagactt gaagcagctc tgggaaacca
181 aggttttgca gtctaaagca acagaagact tcttcagaaa tagcatccaa tcacctctgt
241 ttactcttca gttgccgcac agcttgcacc aaacattgca atcgtcaaca gcatcattag
301 ttattcctgc tggtagaact cttccaagtt ttaccacagc agaactgggc acttcaaact
361 ccagtgcaaa ctttactttt cctggttatc ccattcatgt accagcaggt gtgacactac
421 agactgtatc tggtcacctt tataaagtca atgtaccaat tatggtgaca gagacttctg
481 gaagagcagg tattcttcag catccaattc agcaagtatt tcaacagctt ggccagcctt
541 cagtaataca aactagtgtt ccacaattga atccatggtc tcttcaagca actactgaaa
601 aatcacagag aattgaaacc gtgctacagc aacccgcaat tctaccttct gggccagtag
661 ataggaaaca cttagaaaat gccaccagtg atatacttgt atctcctgga aatgagcata
721 aaatcgtgcc tgaagctttg ttgtgtcatc aggaaagttc tcactatatc agtcttccag
781 gtgttgtatt ttctccacag gtctctcaaa caaattctaa tgtggagtca gtgctcagtg
841 gttcagctag catggctcaa aatctgcatg atgagtccct ctccacaagc cctcatgggg
901 ctctccacca gcacgtgact gatattcagc ttcatattct taaaaatagg atgtatggat
961 gtgattctgt aaagcaacca agaaatatag aggaacccag caacatacct gtatcagaga
1021 aggattctaa ttctcaggtg gatttaagca ttcgggttac tgatgatgat attggtgaaa
1081 taattcaagt agatggaagc ggtgatacat cttccaatga agaaatagga agtacaagag
1141 atgcagatga gaatgaattt ctagggaata ttgacggggg agatctgaag gtacctgaag
1201 aagaagctga cagtatttca aatgaggatt cagccacaaa cagtagtgat aatgaagacc
1261 ctcaagtaaa cattgtagaa gaggaccctt taaattctgg agatgatgtt agtgaacagg
1321 atgtgccaga cctgtttgac acggataatg ttattgtctg tcagtatgat aagattcatc
1381 gaagcaagaa caaatggaaa ttctatttga aagatggtgt tatgtgtttt ggagggagag
1441 actatgtatt tgcaaaagcc attggtgatg cagagtggta aaccttgtga gctcagtaca
1501 tctattttgt gaacatcagt tggattatat tgcatattgt gaattcattt ttattttgaa
1561 tatagtccag cacagagctg ttcaaatttt tagttcactg tatggaattt aataaaatta
1621 taattcagat gcagatacga aaaaaaaaaa aaaaa
//