LOCUS BC025703 1614 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD247 molecule, mRNA (cDNA clone MGC:34513
IMAGE:5222574), complete cds.
ACCESSION BC025703
VERSION BC025703.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1614)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: k Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37595564.
FEATURES Location/Qualifiers
source 1..1614
/db_xref="H-InvDB:HIT000039971"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34513 IMAGE:5222574"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1614
/gene="CD247"
/gene_synonym="CD3-ZETA"
/gene_synonym="CD3H"
/gene_synonym="CD3Q"
/gene_synonym="TCRZ"
/db_xref="GeneID:919"
/db_xref="HGNC:HGNC:1677"
/db_xref="MIM:186780"
CDS 62..556
/gene="CD247"
/gene_synonym="CD3-ZETA"
/gene_synonym="CD3H"
/gene_synonym="CD3Q"
/gene_synonym="TCRZ"
/codon_start=1
/product="CD247 molecule"
/protein_id="AAH25703.1"
/db_xref="GeneID:919"
/db_xref="HGNC:HGNC:1677"
/db_xref="MIM:186780"
/translation="MKWKALFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGV
ILTALFLRVKFSRSADAPAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPQR
RKNPQEGLYNELQKDKMAEAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDALHMQA
LPPR"
BASE COUNT 398 a 421 c 446 g 349 t
ORIGIN
1 cgtcccggcc accgctgcct cagcctctgc ctcccagcct ctttctgagg gaaaggacaa
61 gatgaagtgg aaggcgcttt tcaccgcggc catcctgcag gcacagttgc cgattacaga
121 ggcacagagc tttggcctgc tggatcccaa actctgctac ctgctggatg gaatcctctt
181 catctatggt gtcattctca ctgccttgtt cctgagagtg aagttcagca ggagcgcaga
241 cgcccccgcg taccagcagg gccagaacca gctctataac gagctcaatc taggacgaag
301 agaggagtac gatgttttgg acaagagacg tggccgggac cctgagatgg ggggaaagcc
361 gcagagaagg aagaaccctc aggaaggcct gtacaatgaa ctgcagaaag ataagatggc
421 ggaggcctac agtgagattg ggatgaaagg cgagcgccgg aggggcaagg ggcacgatgg
481 cctttaccag ggtctcagta cagccaccaa ggacacctac gacgcccttc acatgcaggc
541 cctgccccct cgctaacagc caggggattt caccactcaa aggccagacc tgcagacgcc
601 cagattatga gacacaggat gaagcattta caacccggtt cactcttctc aaccactgaa
661 gtattcccct ttatgtacag gatgctttgg ttatatttag ctccaaacct tcacacacag
721 actgttgtcc ctgcactctt taagggagtg tactcccagg gcttacggcc ctggccttgg
781 gccctctggt ttgccggtgg tgcaggtaga cctgtctcct ggcggttcct cgttctccct
841 gggaggcggg cgcactgcct ctcacagctg agttgttgag tctgttttgt aaagtcccca
901 gagaaagcgc agatgctagc acatgcccta atgtctgtat cactctgtgt ctgagtggct
961 tcactcctgc tgtaaatttg gcttctgttg tcaccttcac ctcctttcaa ggtaactgta
1021 ctgggccatg ttgtgcctcc ctggtgagag ggccgggcag aggggcagat ggaaaggagc
1081 ctaggccagg tgcaaccagg gagctgcagg ggcatgggaa ggtgggcggg caggggaggg
1141 tcagccaggg cctgcgaggg cagcgggagc ctccctgcct caggcctctg tgccgcacca
1201 ttgaactgta ccatgtgcta caggggccag aagatgaaca gactgacctt gatgagctgt
1261 gcacaaagtg gcataaaaaa catgtggtta cacagtgtga ataaagtgct gcggagcaag
1321 aggaggccgt tgattcactt cacgctttca gcgaatgaca aaatcatctt tgtgaaggcc
1381 tcgcaggaag acccaacact tgggacctat aactgcccag cggacagtgg caggacagga
1441 aaaacccgtc aatgtactag gatactgctg cgtcattaca gggcacaggc catggatgga
1501 aaacgctctc tgctctgctt tttttctact gttttaattt atactggcat gctaaagcct
1561 tcctattttg cataataaat gcttcagtga aaaaaaaaaa aaaaaaaaaa aaaa
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