LOCUS BC025382 2530 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens transketolase-like 1, mRNA (cDNA clone MGC:26151
IMAGE:4825931), complete cds.
ACCESSION BC025382
VERSION BC025382.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2530)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2530)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC025382.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58082082.
FEATURES Location/Qualifiers
source 1..2530
/db_xref="H-InvDB:HIT000039917"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26151 IMAGE:4825931"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2530
/gene="TKTL1"
/gene_synonym="TKR"
/gene_synonym="TKT2"
/db_xref="GeneID:8277"
/db_xref="HGNC:HGNC:11835"
/db_xref="MIM:300044"
CDS 63..1853
/gene="TKTL1"
/gene_synonym="TKR"
/gene_synonym="TKT2"
/codon_start=1
/product="transketolase-like 1"
/protein_id="AAH25382.2"
/db_xref="GeneID:8277"
/db_xref="HGNC:HGNC:11835"
/db_xref="MIM:300044"
/translation="MADAEARAEFPEEARPDRGTLQVFQDMASRLRIHSIRATCSTSS
GHPTSCSSSSEIMSVLFFYIMRYKQSDPENPDNDRFVLAKRLSFVDVATGWLGQGLGV
ACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVATFDVNRLGH
SGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQVKHKPTAVVAKTFK
GRGTPSIEDAESWHAKPMPRERADAIIKLIESQIQTSRNLDPQPPIEDSPEVNITDVR
MTSPPDYRVGDKIATRKACGLALAKLGYANNRVVVLDGDTRYSTFSEIFNKEYPERFI
ECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDHIRIGGLAESNINIIGSHCG
VSVGDDGASQMALEDIAMFRTIPKCTIFYPTDAVSTEHAVALAANAKGMCFIRTTRPE
TMVIYTPQERFEIGQAKVLRHCVSDKVTVIGAGITVYEALAAADELSKQDIFIRVIDL
FTIKPLDVATIVSSAKATEGRIITVEDHYPQGGIGEAVCAAVSMDPDIQVHSLAVSGV
PQSGKSEELLDMYGISARHIIVAVKCMLLN"
BASE COUNT 636 a 611 c 639 g 644 t
ORIGIN
1 attcgctctt cagacgccgg agacgtagga gtgggtcttc agactccaaa ggggttggac
61 taatggcgga tgctgaggcg agggctgagt tcccggagga ggccagacct gacaggggca
121 ccttgcaggt gtttcaagat atggccagcc gcttgcgaat ccattccatc agggccacat
181 gctccacgag ctccggccac cctacatcat gtagcagttc ttctgagatc atgtctgtgc
241 tgttcttcta catcatgagg tacaagcagt cagatccaga gaatccggac aacgaccgat
301 ttgtcctcgc aaagagactg tcgtttgtgg atgtggcaac aggatggctc ggacaaggac
361 tgggagttgc atgtggaatg gcatatactg gcaagtactt cgacagggcc agctaccggg
421 tgttctgcct catgagtgat ggcgagtcct cagaaggctc tgtctgggag gcaatggcct
481 ttgcttccta ctacagtctg gacaatcttg tggcaacctt tgatgtgaac cgcctgggac
541 acagtggtgc attgcccgcc gagcactgca taaacatcta tcagaggcgc tgcgaagcct
601 ttgggtggaa cacttatgtg gtggacggcc gggacgtgga ggcactgtgc caggtattct
661 ggcaggcttc tcaggtgaag cacaagccca ctgctgtggt ggccaagacc ttcaagggcc
721 ggggcacccc aagtattgag gatgcagaaa gttggcatgc aaagccaatg ccgagagaaa
781 gagcagatgc cattatcaaa ttaattgaga gccagataca gaccagcagg aatcttgacc
841 cacagccccc cattgaggac tcacctgaag tcaacatcac agatgtaagg atgacctctc
901 cacctgatta cagagttggt gacaagatag ctactcggaa agcatgcggt ctggctctgg
961 ctaagctggg ctacgcgaac aacagagtcg ttgtgctgga tggtgacacc aggtactcta
1021 ctttctctga gatattcaac aaggagtacc ctgagcgctt catcgagtgc tttatggctg
1081 aacaaaacat ggtgagcgtg gctctgggct gtgcctcccg tggacggacc attgcttttg
1141 ctagcacctt tgctgccttt ctgactcgag catttgatca catccggata ggaggcctcg
1201 ctgagagcaa catcaacatt attggttccc actgtggggt atctgttggt gacgatggtg
1261 cttcccagat ggccctggag gatatagcca tgttccgaac cattcccaag tgcacgatct
1321 tctacccaac tgatgccgtc tccacggagc atgctgttgc tctggcagcc aatgccaagg
1381 ggatgtgctt cattcggacc acccgaccag aaactatggt tatttacacc ccacaagaac
1441 gctttgagat cggacaggcc aaggtcctcc gccactgtgt cagtgacaag gtcacagtta
1501 ttggagctgg aattactgtg tatgaagcct tagcagctgc tgatgagctt tcgaaacaag
1561 atatttttat ccgtgtcatc gacctgttta ccattaaacc tctggatgtc gccaccatcg
1621 tctccagtgc aaaagccaca gagggccgga tcattacagt ggaggatcac tacccgcaag
1681 gtggcatcgg ggaagctgtc tgcgcagccg tctccatgga tcctgacatt caggttcatt
1741 cgctggcagt gtcgggagtg ccccagagtg ggaagtccga ggaattgctg gatatgtatg
1801 gaattagtgc cagacatatc atagtggccg tgaaatgcat gttgctgaac taaaatagct
1861 gttagctttg gtcttttggc ctctttaccc tgtgtttatg tttgttccaa aaccatcatt
1921 taaatctcta ctgtcacatt ttgtttctta aaagcaaagc cagctaacac cttcattcat
1981 ccctagttcg gaaattcaag ctaactactt accctttaaa ctgtcactgc atatgcaagt
2041 accgctctaa tttttggatc attaagggga gttacacaac ttttaagtga aaaaaatagg
2101 taacaaaaca accacctgat agtaagtttt ctgataagac tatagataag tggtagaggt
2161 aatcaattct tccgaagtgt ttccttcgtg aataactggt agaggtaata gttttttcaa
2221 tgtatttcct tcatgagtaa agaaaatgtg gattgaagta tagattccag tagcctagtt
2281 tccacagcac gataacacca tgacgcctac tgctgttccc accttgggat tctgtgtgct
2341 gccatcccac ctgcagctgc cctggaattc ccttcgctgt ttgccttcat ctccctccac
2401 gtttgagagg ctgtcaggca gcagcgaaag cttgttagga tgtcctgtgc tgcttgtgat
2461 gagagcctcc acactgtact gttcaagtca atgttaataa agcatttcaa aaccaaaaaa
2521 aaaaaaaaaa
//