LOCUS BC025373 1561 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit
D, mRNA (cDNA clone MGC:22422 IMAGE:4108457), complete cds.
ACCESSION BC025373
VERSION BC025373.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1561)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913437.
FEATURES Location/Qualifiers
source 1..1561
/db_xref="H-InvDB:HIT000258979"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22422 IMAGE:4108457"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1561
/gene="ATP6V1D"
/gene_synonym="VATD"
/gene_synonym="VMA8"
/db_xref="GeneID:51382"
/db_xref="HGNC:HGNC:13527"
/db_xref="MIM:609398"
CDS 240..983
/gene="ATP6V1D"
/gene_synonym="VATD"
/gene_synonym="VMA8"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 34kDa, V1
subunit D"
/protein_id="AAH25373.1"
/db_xref="GeneID:51382"
/db_xref="HGNC:HGNC:13527"
/db_xref="MIM:609398"
/translation="MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRF
RQILKKIIETKMLMGEVMREAAFSLAEAMFTAGDFSTTVIQNVNKAQVKIRAKKDNVA
GVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDE
AIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEK
DLEQRRAAGEVLEPANLLAEEKDEDLLFE"
BASE COUNT 472 a 311 c 364 g 414 t
ORIGIN
1 ggggggtgcg cgcgcctcga catccgggca acgcctctgt tctgtcctcc cccttcgtcg
61 cctgtgacaa ccggaagcgg aagtgaaaat gggtgtccct gctgcctctt agcaacaaga
121 ggggtcaagt gacacaacca gctgactccc gtagaggaag acactgcgga ggccagttct
181 ggagctattg cagcctcggt tgcccggccg gggacccgag ccgaaaggtt atcgtcagaa
241 tgtcgggcaa agaccgaatt gaaatctttc cctcgcgaat ggcacagacc atcatgaagg
301 ctcgtttaaa gggagcacag acaggtcgaa acctcctgaa gaaaaaatct gatgccttaa
361 ctcttcgatt tcgacagatc ctaaagaaga taatagagac taaaatgttg atgggcgaag
421 tgatgagaga agctgccttt tcactagctg aagccatgtt cacagcaggt gacttcagca
481 ctacagttat ccaaaatgtc aataaagcgc aagtgaagat tcgagcgaag aaagataatg
541 tagcaggtgt tactttgcca gtatttgaac attaccatga aggaactgac agttatgaac
601 tgactggttt agccagaggt ggggaacagt tggctaaatt aaagaggaat tatgccaaag
661 cagtggaact actggtggaa ctagcttctc tgcagacttc ttttgttact ttggatgaag
721 ctattaagat aaccaacagg cgtgtaaatg ccattgaaca tgtcatcatt ccccggattg
781 aacgtactct tgcttatatc atcacagagc tggatgagag agagcgagaa gagttctata
841 ggttaaagaa aatacaagag aagaaaaaga ttctaaagga aaaatctgag aaggacttgg
901 agcaaaggag agcagctgga gaggtgttgg agcctgctaa tcttctggct gaagagaagg
961 acgaggatct tctatttgaa taatctttcc tgttctggtt ctttgagaaa ccctaacact
1021 ggcttcattt taattcacag tgtgtaggtt tgatttgtgt ggctatttat tttttggcct
1081 aagaatttca ctggttgtaa aatttaccta gatgtctatt tatgggatta cttttgcaga
1141 atcataattt agcaaccatt tatcatggat gaaagagatc tgtaaaacct gcccaggaac
1201 ttacagaatt tactttgcag aagcgttatc atactccatt tacatctgtg ttacacgtga
1261 tctgcttacc aagcatatta ggaaatacct cttaggaagc attagcggtc tcaggccaat
1321 tactgtggag cagctttcat tcctacccac ttgcaaacct tggcgctgtt gtctgagatt
1381 gctgcagcca ttcttgttac catggtactt ctcaaacttt gtgaaaacct gcacttttcc
1441 ttgcatgaca ggttcctgtc ttgtctgtca tgggagccat tctgccaatt taaatgcgac
1501 tgtggtataa acagtaaaat gatttaaaag caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 a
//