LOCUS BC025358 3697 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family D (ALD), member 1,
mRNA (cDNA clone MGC:39449 IMAGE:4907640), complete cds.
ACCESSION BC025358
VERSION BC025358.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3697)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3697)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: l Column: 14.
FEATURES Location/Qualifiers
source 1..3697
/db_xref="H-InvDB:HIT000039907"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39449 IMAGE:4907640"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3697
/gene="ABCD1"
/gene_synonym="ABC42"
/gene_synonym="ALDP"
/gene_synonym="AMN"
/db_xref="GeneID:215"
/db_xref="HGNC:HGNC:61"
/db_xref="MIM:300371"
CDS 400..2637
/gene="ABCD1"
/gene_synonym="ABC42"
/gene_synonym="ALDP"
/gene_synonym="AMN"
/codon_start=1
/product="ATP-binding cassette, sub-family D (ALD), member
1"
/protein_id="AAH25358.1"
/db_xref="GeneID:215"
/db_xref="HGNC:HGNC:61"
/db_xref="MIM:300371"
/translation="MPVLSRPRPWRGNTLKRTAVLLALAAYGAHKVYPLVRQCLAPAR
GLQAPAGEPTQEASGVAAAKAGMNRVFLQRLLWLLRLLFPRVLCRETGLLALHSAALV
SRTFLSVYVARLDGRLARCIVRKDPRAFGWQLLQWLLIALPATFVNSAIRYLEGQLAL
SFRSRLVAHAYRLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKP
LLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRK
GELRYMHSRVVANSEEIAFYGGHEVELALLQRSYQDLASQINLILLERLWYVMLEQFL
MKYVWSASGLLMVAVPIITATGYSESDAEAVKKAALEKKEEELVSERTEAFTIARNLL
TAAADAIERIMSSYKEVTELAGYTARVHEMFQVFEDVQRCHFKRPRELEDAQAGSGTI
GRSGVRVEGPLKIRGQVVDVEQGIICENIPIVTPSGEVVVASLNIRVEEGMHLLITGP
NGCGKSSLFRILGGLWPTYGGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSVEDM
QRKGYSEQDLEAILDVVHLHHILQREGGWEAMCDWKDVLSGGEKQRIGMARMFYHRPK
YALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWKFE
KLDSAARLSLTEEKQRLEQQLAGIPKMQRRLQELCQILGEAVAPAHVPAPSPQGPGGL
QGAST"
BASE COUNT 688 a 1272 c 1139 g 598 t
ORIGIN
1 gccaggctgc ggagcggacg gacgcgcctg gtgccccggg gaggggcgcc accgggggag
61 gaggaggagg agaaggtgga gaggaagaga cgccccctct gcccgagacc tctcaaggcc
121 ctgacctcag gggccagggc actgacagga caggagagcc aagttcctcc acttgggctg
181 cccgaagagg ccgcgaccct ggagggccct gagcccaccg caccaggggc cccagcacca
241 ccccgggggc ctaaagcgac agtctcaggg gccatcgcaa ggtttccagt tgcctagaca
301 acaggcccag ggtcagagca acaatccttc cagccacctg cctcaactgc tgccccaggc
361 accagcccca gtccctacgc ggcagccagc ccaggtgaca tgccggtgct ctccaggccc
421 cggccctggc gggggaacac gctgaagcgc acggccgtgc tcctggccct cgcggcctat
481 ggagcccaca aagtctaccc cttggtgcgc cagtgcctgg ccccggccag gggtcttcag
541 gcgcccgccg gggagcccac gcaggaggcc tccggggtcg cggcggccaa agctggcatg
601 aaccgggtat tcctgcagcg gctcctgtgg ctcctgcggc tgctgttccc ccgggtcctg
661 tgccgggaga cggggctgct ggccctgcac tcggccgcct tggtgagccg caccttcctg
721 tcggtgtatg tggcccgcct ggacggaagg ctggcccgct gcatcgtccg caaggacccg
781 cgggcttttg gctggcagct gctgcagtgg ctcctcatcg ccctccctgc taccttcgtc
841 aacagtgcca tccgttacct ggagggccaa ctggccctgt cgttccgcag ccgtctggtg
901 gcccacgcct accgcctcta cttctcccag cagacctact accgggtcag caacatggac
961 gggcggcttc gcaaccctga ccagtctctg acggaggacg tggtggcctt tgcggcctct
1021 gtggcccacc tctactccaa cctgaccaag ccactcctgg acgtggctgt gacttcctac
1081 accctgcttc gggcggcccg ctcccgtgga gccggcacag cctggccctc ggccatcgcc
1141 ggcctcgtgg tgttcctcac ggccaacgtg ctgcgggcct tctcgcccaa gttcggggag
1201 ctggtggcag aggaggcgcg gcggaagggg gagctgcgct acatgcactc gcgtgtggtg
1261 gccaactcgg aggagatcgc cttctatggg ggccatgagg tggagctggc cctgctacag
1321 cgctcctacc aggacctggc ctcgcagatc aacctcatcc ttctggaacg cctgtggtat
1381 gttatgctgg agcagttcct catgaagtat gtgtggagcg cctcgggcct gctcatggtg
1441 gctgtcccca tcatcactgc cactggctac tcagagtcag atgcagaggc cgtgaagaag
1501 gcagccttgg aaaagaagga ggaggagctg gtgagcgagc gcacagaagc cttcactatt
1561 gcccgcaacc tcctgacagc ggctgcagat gccattgagc ggatcatgtc gtcgtacaag
1621 gaggtgacgg agctggctgg ctacacagcc cgggtgcacg agatgttcca ggtatttgaa
1681 gatgttcagc gctgtcactt caagaggccc agggagctag aggacgctca ggcggggtct
1741 gggaccatag gccggtctgg tgtccgtgtg gagggccccc tgaagatccg aggccaggtg
1801 gtggatgtgg aacaggggat catctgcgag aacatcccca tcgtcacgcc ctcaggagag
1861 gtggtggtgg ccagcctcaa catcagggtg gaggaaggca tgcatctgct catcacaggc
1921 cccaatggct gcggcaagag ctccctgttc cggatcctgg gtgggctctg gcccacgtac
1981 ggtggtgtgc tctacaagcc cccaccccag cgcatgttct acatcccgca gaggccctac
2041 atgtctgtgg gctccctgcg tgaccaggtg atctacccgg actcagtgga ggacatgcaa
2101 aggaagggct actcggagca ggacctggaa gccatcctgg acgtcgtgca cctgcaccac
2161 atcctgcagc gggagggagg ttgggaggct atgtgtgact ggaaggacgt cctgtcgggt
2221 ggcgagaagc agagaatcgg catggcccgc atgttctacc acaggcccaa gtacgccctc
2281 ctggatgaat gcaccagcgc cgtgagcatc gacgtggaag gcaagatctt ccaggcggcc
2341 aaggacgcgg gcattgccct gctctccatc acccaccggc cctccctgtg gaaataccac
2401 acacacttgc tacagttcga tggggagggc ggctggaagt tcgagaagct ggactcagct
2461 gcccgcctga gcctgacgga ggagaagcag cggctggagc agcagctggc gggcattccc
2521 aagatgcagc ggcgcctcca ggagctctgc cagatcctgg gcgaggccgt ggccccagcg
2581 catgtgccgg cacctagccc gcaaggccct ggtggcctcc agggtgcctc cacctgacac
2641 aaccgtcccc ggcccctgcc ccgcccccaa gctcggatca catgaaggag acagcagcac
2701 ccacccatgc acgcaccccg cccctgcatg cctggcccct cctcctagaa aacccttccc
2761 gccctcggga aagtagatgt ggagggtggc gccctgcgta accctcgccc tgtccctccc
2821 actccctggg ggcgctgttc cacagtgact gggccctgtc cagggcagtg agtcctctac
2881 tttgctccgt ggaggaagct ggggtacaag gggcccagtg ctggccacac agcagcgcag
2941 ccgagcccca ggagcccgtc aggccacagc ccctggcact gcaggtggcc tccctccaga
3001 gactcgagtc cccatgattc cctcctcatc agtctctcaa agaccccatg gtccatcccc
3061 tgagggtggt cagccaaggc tcccgttccg tgggatgcca taaaagccgc ccagtgggac
3121 ccacagtcac acagagcgcc tcacctgcat cctctccccc acaagagccc caaagatccc
3181 acgggagagg ggagagggac gcacagcact gcctgccaag cgagaatgca ggccccgccc
3241 cctcggcccc tcaccacctc tttctacagc ctaatttatt ggattcccta ttcgtagcca
3301 tctccgtggc caatgtgact accgtgccag cagcgggggc ggcccagcct ctgagtcccg
3361 tggggccccg gctcccaccg gtgccaaacc cagcccctgc ggccgtcacc ccgccagcct
3421 acactgccag ccgccaccgg ggcacacggg cctctgcttg ccagccagga gtgcggacac
3481 catgttccca gctcagtgcc aaagaggggt caccaggggg agctgtctgc ggagccagcg
3541 cctgcccgag agagacccca ccgccaccgt gtgcctttcc cgggccctca gccctcgggc
3601 cgggcaccac ccccagtccc cccagtaaaa gcctccactg gcaaatgcag tccttcctcc
3661 ctgcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//