LOCUS BC025356 1686 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens chromosome 4 open reading frame 15, mRNA (cDNA clone
MGC:39444 IMAGE:4906369), complete cds.
ACCESSION BC025356
VERSION BC025356.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1686)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1686)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725710.
FEATURES Location/Qualifiers
source 1..1686
/db_xref="H-InvDB:HIT000039906"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39444 IMAGE:4906369"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1686
/gene="C4orf15"
/gene_synonym="IT1"
/gene_synonym="MGC4701"
/db_xref="GeneID:79441"
CDS 149..1585
/gene="C4orf15"
/gene_synonym="IT1"
/gene_synonym="MGC4701"
/codon_start=1
/product="C4orf15 protein"
/protein_id="AAH25356.1"
/db_xref="GeneID:79441"
/translation="MASVTSHKSLRLNAKEEEATKKLKQSQGILNAMITKISNELQAL
TDEVTQLMMFFRHSNLGQGTNPLVFLSQFSLEKYLSQEEQSTAALTLYTKKQFFQGIH
EVVESSNEDNFQLLDIQTPSICDNQEILEERRLEMARLQLAYICAQHQLIHLKASNSS
MKSSIKWAEESLHSLTSKAVDKENLDAKISSLTSEIMKLEKEVTQIKDRSLPAVVREN
AQLLNMPVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDI
YRQLENLVQELSQSNMMLYKQLEMLTDPSVSQQINPRNTIDTKDYSTHRLYQVLEGEN
KKKELFLTHGNLEEVAEKLKQNISLVQDQLAVSAQEHSFFLSKRNKDVDMLCDTLYQG
GNQLLLSDQELTEQFHKVESQLNKLNHLLTDILADVKTKRKTLANNKLHQMEREFYVY
FLKDEDYLKDIVENLETQSKIKAVSLED"
BASE COUNT 645 a 249 c 317 g 475 t
ORIGIN
1 attggatgaa gctcttaaaa cgtgtaaaac ttctgatttg aagacaccta gactggatga
61 taaagagctg gagaaattag aggatgaggt tcaaactcta ctgaaattaa agaacctaaa
121 aattcagcga cgtaataaat gtcaattgat ggcttcagta actagccaca aatctctgag
181 gttaaatgct aaagaagaag aagccactaa aaagctgaag cagagtcaag gaattctaaa
241 tgcaatgatc actaagatca gtaatgaact tcaggctctt actgatgaag ttacacaatt
301 gatgatgttc ttcagacatt ctaatttagg tcaagggaca aatccactgg tatttttatc
361 gcaattttcc ttggaaaaat acctaagtca ggaagagcaa agcacagcag cattaacttt
421 gtataccaaa aaacagttct ttcagggtat acatgaagta gttgaaagtt caaatgaaga
481 caattttcaa cttttagata tacagacacc atctatttgt gataatcaag aaatccttga
541 ggagagacga ctagagatgg ctagactgca gctcgcatac atttgtgctc aacatcagtt
601 aattcactta aaagcaagta attcgagcat gaagtcaagt ataaaatggg cagaggagag
661 tcttcacagc ctaaccagca aggctgtgga caaagaaaat ttggatgcta aaatttctag
721 cttgaccagt gagattatga aacttgaaaa agaggtcact caaataaaag acagaagttt
781 acctgctgtg gtaagagaga atgcccagtt attgaatatg ccagtggtaa agggagattt
841 tgatctgcag attgctaaac aagattatta tacagcaaga caagagttag ttttaaatca
901 attaataaaa caaaaggcat catttgaact tctacagtta tcatatgaaa ttgaattaag
961 aaagcatcgg gacatatatc gtcaacttga aaatttggtt caagaactta gtcaaagtaa
1021 catgatgctc tacaagcaat tagaaatgtt aacagatcca tcagtttctc aacagataaa
1081 tccaaggaat accattgata ctaaggatta ttctactcat aggctttacc aagttttgga
1141 gggagagaat aagaaaaaag aattgtttct aactcatgga aaccttgagg aagtggctga
1201 gaaattgaaa cagaatattt ctttagtaca agatcagttg gcagtatctg ctcaagaaca
1261 ttctttcttt ctgtccaaac ggaataagga tgtggacatg ctttgtgata ctttgtatca
1321 aggaggaaat cagcttttgc ttagtgatca ggagttaaca gagcagtttc ataaagttga
1381 atctcaactg aataagctaa atcatctcct cactgatatt cttgctgatg tgaagacaaa
1441 aagaaaaact ttggcaaata ataaattaca tcaaatggaa agagaattct atgtatattt
1501 tttaaaagat gaagattatc tgaaagatat tgtggagaat ttagaaactc aatcaaagat
1561 taaggctgtt agtcttgaag attgaaaatt actgaaaact gaatctttat tacgtgtcct
1621 cttttattta ttagaagact gtgtataata aacactacta aatttttaaa aaaaaaaaaa
1681 aaaaaa
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