LOCUS BC025261 2079 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens septin 5, mRNA (cDNA clone MGC:39148 IMAGE:4622405),
complete cds.
ACCESSION BC025261
VERSION BC025261.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2079)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2079)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331275.
FEATURES Location/Qualifiers
source 1..2079
/db_xref="H-InvDB:HIT000039868"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39148 IMAGE:4622405"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2079
/gene="SEPT5"
/gene_synonym="CDCREL"
/gene_synonym="CDCREL-1"
/gene_synonym="CDCREL1"
/gene_synonym="H5"
/db_xref="GeneID:5413"
/db_xref="HGNC:HGNC:9164"
/db_xref="MIM:602724"
CDS 90..1199
/gene="SEPT5"
/gene_synonym="CDCREL"
/gene_synonym="CDCREL-1"
/gene_synonym="CDCREL1"
/gene_synonym="H5"
/codon_start=1
/product="septin 5"
/protein_id="AAH25261.1"
/db_xref="GeneID:5413"
/db_xref="HGNC:HGNC:9164"
/db_xref="MIM:602724"
/translation="MSTGLRYKSKLATPEDKQDIDKQYVGFATLPNQVHRKSVKKGFD
FTLMVAGESGLGKSTLVHSLFLTDLYKDRKLLSAEERISQTVEILKHTVDIEEKGVKL
KLTIVDTPGFGDAVNNTECWKPITDYVDQQFEQYFRDESGLNRKNIQDNRVHCCLYFI
SPFGHGLRPVDVGFMKALHEKVNIVPLIAKADCLVPSEIRKLKERIREEIDKFGIHVY
QFPECDSDEDEDFKQQDRELKESAPFAVIGSNTVVEAKGQRVRGRLYPWGIVEVENQA
HCDFVKLRNMLIRTHMHDLKDVTCDVHYENYRAHCIQQMTSKLTQDSRMESPIPILPL
PTPDAETEKLIRMKDEELRRMQEMLQRMKQQMQDQ"
BASE COUNT 463 a 663 c 607 g 346 t
ORIGIN
1 ctcaccccgc agcccggcct cggcctccgc cgcttgtcgt cgcgccccgc ccgcgagccc
61 gccccgcacg tcccccgccg gcggccacca tgagcacagg cctgcggtac aagagcaagc
121 tggcgacccc agaggacaag caggacattg acaagcagta cgtgggcttc gccacactgc
181 ccaaccaggt gcaccgcaag tcggtgaaga aaggctttga cttcacactc atggtggctg
241 gtgagtcagg cctggggaag tccacactgg tccacagcct cttcctgaca gacttgtaca
301 aggaccggaa gctgctcagt gctgaggagc gcatcagcca gacggtagag attctaaaac
361 acacggtgga cattgaggag aagggagtca agctgaagct caccatcgtg gacacgccgg
421 gattcgggga cgctgtcaac aacaccgagt gctggaagcc catcaccgac tatgtggacc
481 agcagtttga gcagtacttc cgtgatgaga gcggcctcaa ccgaaagaac atccaagaca
541 accgagtgca ctgctgccta tacttcatct cccccttcgg gcatgggctg cggccagtgg
601 atgtgggttt catgaaggca ttgcatgaga aggtcaacat cgtgcctctc atcgccaaag
661 ctgactgtct tgtccccagt gagatccgga agctgaagga gcggatccgg gaggagattg
721 acaagtttgg gatccatgta taccagttcc ctgagtgtga ctcggacgag gatgaggact
781 tcaagcagca ggaccgggaa ctgaaggaga gcgcgccctt cgccgttata ggcagcaaca
841 cggtggtgga ggccaagggg cagcgggtcc ggggccgact gtacccctgg gggatcgtgg
901 aggtggagaa ccaggcgcat tgcgacttcg tgaagctgcg caacatgctc atccgcacgc
961 atatgcacga cctcaaggac gtgacgtgcg acgtgcacta cgagaactac cgcgcgcact
1021 gcatccagca gatgaccagc aaactgaccc aggacagccg catggagagc cccatcccga
1081 tcctgccgct gcccaccccg gacgccgaga ctgagaagct tatcaggatg aaggatgagg
1141 aactgaggcg catgcaggag atgctgcaga ggatgaagca gcagatgcag gaccagtgac
1201 gctcgccgcg gacacaccgt ccgtctccgg gacgccctcg cacccctgga caccagaccg
1261 gactgttccc gacccggaga cgcggggcca cagcccccag ctgaccctaa tttattctca
1321 gcaccacccc ctcccaggtc attgtgtctg tttccgaggg gcctggaccg tagcccccgc
1381 ccagctggcc ctctctgacc ttgggggatc aggagcgaag ttgggcggga cttcagagat
1441 ccgcctccct tgcccttccc ccgcccccgg acggtcacag cacccaaacc gcaggccctg
1501 ctctggcagg caggcaaagc taggcagaag aggattccca ggatcctggg tctgttccct
1561 gccccagtgc tgcagaacgg acttgggagc cctcctttgc ctgctcccgc gggtcaccca
1621 gcgagtgctg agaccccatt ttctgtcgag gcgggccgag tcttccctta tccccagacg
1681 cctagcgggc agggttgggc tgaatcaaat gggagccctc cagacataag gaggccagag
1741 gctgcaagga gcggggtcgt gaccgcttac accccttctc cacagcccgg cccgacctgg
1801 agggcccccg gggcactggg cggtgagcca cctcctggca actctcggtg ccgtcccctg
1861 ccctcgctcg aggcctcttc tccccagcac cgctgtggtg tgccgggatc ctgagcctag
1921 gcctcccgat gttcccaccc gcatgatccc ttcccgccac acgatgctcc gttttcttcc
1981 gttgtgaatg ccgcgtcctg tcctggtgac aggagaacaa tgttggtgaa cgtcaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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