LOCUS BC024725 2453 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens ankyrin repeat domain 50, mRNA (cDNA clone MGC:30046
IMAGE:4943808), complete cds.
ACCESSION BC024725
VERSION BC024725.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2453)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2453)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: i Column: 13.
FEATURES Location/Qualifiers
source 1..2453
/db_xref="H-InvDB:HIT000039830"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:30046 IMAGE:4943808"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2453
/gene="ANKRD50"
/gene_synonym="KIAA1223"
/db_xref="GeneID:57182"
/db_xref="HGNC:HGNC:29223"
/db_xref="IMGT/GENE-DB:29223"
/db_xref="MIM:29223"
CDS 121..2352
/gene="ANKRD50"
/gene_synonym="KIAA1223"
/codon_start=1
/product="ANKRD50 protein"
/protein_id="AAH24725.1"
/db_xref="GeneID:57182"
/db_xref="HGNC:HGNC:29223"
/db_xref="IMGT/GENE-DB:29223"
/db_xref="MIM:29223"
/translation="MGHREIVEHLLDHGAEVNHEDVDGRTALSVAALCVPASKGHASV
VSLLIDRGAEVDHCDKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAA
ASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDA
GWTPLHMAAFEGHRLICEALIEQGARTNEIDNDGRIPFILASQEGHYDCVQILLENKS
NIDQRGYDGRNALRVAALEGHRDIVELLFSHGADVNCKDADGRPTLYILALENQLTMA
EYFLENGANVEASDAEGRTALHVSCWQGHMEMVQVLIAYHADVNAADNEKRSALQSAA
WQGHVKVVQLLIEHGAVVDHTCNQGATALCIAAQEGHIDVVQVLLEHGADPNHADQFG
RTAMRVAAKNGHSQIIKLLEKYGASSLNGCSPSPVHTMEQKPLQSLSSKVQSLTIKSN
SSGSTGGGDMQPSLRGLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRT
TSSTATAQTVPIDSFHNLSFTEQIQQHSLPRSRSRQSIVSPSSTTQSLGQSHNSPSSE
FEWSQVKPSLKSTKASKGGKSENSAKSGSAGKKAKQSNSSQPKVLEYEMTQFDRRGPI
AKSGTAAPPKQMPAESQCKIMIPSAQQEIGRSQQQFLIHQQSGEQKKRNGIMTNPNYH
LQSNQVFLGRVSVPRTMQDRGHQEVLEGYPSSETELSLKQALKLQIEGSDPSFNYKKE
TPL"
BASE COUNT 768 a 464 c 578 g 643 t
ORIGIN
1 gctttgagag cagcagcatg gggaggacac gaggatattg tactgaattt gctacaacat
61 ggcgctgaag tgaacaaagc tgataatgaa ggtagaactg ctttgatagc agcagcatac
121 atgggacata gagagattgt ggaacaccta ctggaccatg gagcagaagt aaatcatgag
181 gatgttgatg gcaggactgc actctctgta gctgcacttt gtgtgcctgc aagtaaaggg
241 cacgcatcag ttgttagcct tttaattgat cgaggtgctg aagtagatca ttgtgataaa
301 gatggcatga ctccactgct ggtagctgcc tatgaaggac atgttgatgt ggttgacttg
361 cttctagaag ggggagcaga tgtagatcac acagataaca atggccgtac acccctctta
421 gcagcagcgt ctatgggtca tgcatcagtt gtaaatacac ttttgttttg gggtgcagct
481 gtggatagta ttgatagtga aggtaggaca gtcctcagta tagcttcagc acaaggaaat
541 gttgaggtgg tacgtactct actggataga gggttagatg aaaatcacag agatgatgct
601 ggatggacac ctttgcacat ggcagctttt gaagggcaca gattgatatg tgaagcactt
661 attgaacaag gtgctagaac aaatgagatt gacaatgatg gacgaatccc tttcatatta
721 gcttcacaag agggtcatta tgattgtgtt caaatattac tggaaaacaa atccaacatt
781 gatcaaagag gttatgatgg aagaaatgca ctgcgggttg ctgcattaga agggcacagg
841 gacattgttg aattgctttt tagccatggt gctgatgtta actgcaaaga tgctgatggt
901 cggcctacac tttatatctt ggccttagaa aatcagctta caatggccga atatttttta
961 gaaaatggtg caaacgtaga agcaagtgat gctgaaggaa ggacagcact tcatgtgtct
1021 tgttggcaag gccatatgga aatggtgcag gtcctgatag cataccatgc tgacgtcaat
1081 gctgcagaca atgaaaagcg ctctgctttg cagtctgcag cctggcaggg ccatgtaaaa
1141 gtggttcagc ttctgattga gcatggtgct gtagttgacc atacatgtaa ccaaggtgca
1201 actgcactct gtattgcagc ccaggaaggg cacattgatg ttgttcaggt cttattagag
1261 catggtgctg atccaaacca tgctgatcaa tttggacgca ctgctatgcg tgttgcagcc
1321 aaaaatggac attctcagat aattaaatta ttagaaaaat atggtgcatc tagtttgaat
1381 ggctgttccc catctcctgt tcacacaatg gagcaaaaac ctctacagtc attgtcttca
1441 aaagtgcagt cattaacaat taaatcaaat agctctggta gtactggtgg aggggatatg
1501 cagccttcgt tacgtggttt acctaatggg cctactcatg cttttagttc tccttcagaa
1561 tctccagatt ctacagttga ccggcagaag tcatcactgt caaataattc cctgaaaagc
1621 tcaaaaaatt catctttgag aactacttca tctacagcaa cggctcaaac agtgccaatt
1681 gatagctttc ataacttgtc atttacagaa caaattcagc agcattcatt gccacgcagt
1741 agaagtcgac agtcaattgt ttccccatct tccacaacac agtccttagg acagagtcat
1801 aattcaccaa gtagtgaatt tgagtggagt caagtaaagc ccagtttgaa gtcaactaaa
1861 gcaagtaaag gggggaaatc agaaaattct gccaagtctg gatcagctgg gaaaaaagcg
1921 aaacaaagta attcttcaca gccaaaggtt ttagaatatg aaatgactca gtttgataga
1981 agaggaccta tagccaaatc cgggactgct gcaccaccta aacaaatgcc agcagaatct
2041 caatgcaaaa ttatgatacc ttcagctcag caggaaattg gtcgatctca acagcagttt
2101 cttattcacc aacaaagtgg ggaacagaag aagagaaatg gaataatgac aaatccaaat
2161 tatcatcttc agagcaacca ggtttttctt ggtagggttt cagtcccacg aacaatgcaa
2221 gatagagggc atcaggaagt gttggaggga tacccttcct cagagacaga attaagcctt
2281 aaacaagctc tgaagcttca gattgaaggt tctgacccta gcttcaacta taaaaaggaa
2341 acaccattat aaaagtttcc tattctgtga aacagaagac attgtgatgg agtggttctt
2401 cagctactgg atggaaacat atgcctgttg atttgctgaa aaaaaaaaaa aaa
//