LOCUS BC024601 759 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens capping protein (actin filament) muscle Z-line, beta,
mRNA (cDNA clone IMAGE:3864139), partial cds.
ACCESSION BC024601
VERSION BC024601.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 759)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 759)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: j Column: 21.
FEATURES Location/Qualifiers
source 1..759
/db_xref="H-InvDB:HIT000090948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3864139"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..759
/gene="CAPZB"
/gene_synonym="CAPB"
/gene_synonym="CAPPB"
/gene_synonym="CAPZ"
/db_xref="GeneID:832"
/db_xref="MIM:601572"
CDS <1..571
/gene="CAPZB"
/gene_synonym="CAPB"
/gene_synonym="CAPPB"
/gene_synonym="CAPZ"
/codon_start=2
/product="CAPZB protein"
/protein_id="AAH24601.1"
/db_xref="GeneID:832"
/db_xref="MIM:601572"
/translation="EDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHG
FAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSG
TMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGL
RSVQTFADKSKQEALKNDLVEALKRKQQC"
misc_feature 2..559
/gene="CAPZB"
/gene_synonym="CAPB"
/gene_synonym="CAPPB"
/gene_synonym="CAPZ"
/note="F_actin_cap_B; Region: F-actin capping protein,
beta subunit"
/db_xref="CDD:pfam01115"
BASE COUNT 220 a 189 c 189 g 161 t
ORIGIN
1 ggaggatggg gccatgccgt cagctcggct gagaaagctg gaggtggaag ccaacaatgc
61 ctttgaccag tatcgagacc tgtattttga aggtggcgtc tcatctgtct acctctggga
121 tctggatcat ggctttgctg gagtgatcct cataaagaag gctggagatg gatcaaagaa
181 gatcaaaggc tgctgggatt ccatccacgt ggtagaagtg caggagaaat ccagcggtcg
241 caccgcccat tacaagttga cctccacggt gatgctgtgg ctgcagacca acaaatctgg
301 ctctggcacc atgaacctcg gaggcagcct taccagacag atggagaagg atgaaactgt
361 gagtgactgc tccccacaca tagccaacat cgggcgcctg gtagaggaca tggaaaataa
421 aatcagaagt acgctgaacg agatctactt tggaaaaaca aaggatatcg tcaatgggct
481 gaggtctgtg cagacttttg cagacaaatc aaaacaagaa gctctgaaga atgacctggt
541 ggaggctttg aagagaaagc agcaatgcta aacctctgtt tcatgctaac cagacacgcc
601 gtgcactcgt tagattcctt tcttagaaaa ctcgttttct gctcccttcc ctcgtccctt
661 ccctccccga caggtcacat aacagctgca tcattgaccg cacagcgcca tctctccctg
721 agaataaagc cgatagccac cctcaaaaaa aaaaaaaaa
//