LOCUS BC024208 2439 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens RNA binding motif protein 23, mRNA (cDNA clone
MGC:4458 IMAGE:2960467), complete cds.
ACCESSION BC024208
VERSION BC024208.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2439)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC024208.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147682.
FEATURES Location/Qualifiers
source 1..2439
/db_xref="H-InvDB:HIT000039770"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4458 IMAGE:2960467"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2439
/gene="RBM23"
/gene_synonym="CAPERbeta"
/gene_synonym="FLJ10482"
/gene_synonym="MGC4458"
/gene_synonym="PP239"
/db_xref="GeneID:55147"
/db_xref="HGNC:HGNC:20155"
CDS 137..1408
/gene="RBM23"
/gene_synonym="CAPERbeta"
/gene_synonym="FLJ10482"
/gene_synonym="MGC4458"
/gene_synonym="PP239"
/codon_start=1
/product="RNA binding motif protein 23"
/protein_id="AAH24208.1"
/db_xref="GeneID:55147"
/db_xref="HGNC:HGNC:20155"
/translation="MASDDFDIVIEAMLEAPYKKEEDEQQRKEVKKDYPSNTTSSTSN
SGNETSGSSTIGETSNRSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDH
RREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAAR
IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGV
PIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI
VLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDIT
FPDGDQELDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQAAALQLNGAVPLGA
LNPAALTALSPALNLASQCFQLSSLFTPQTM"
BASE COUNT 617 a 612 c 613 g 597 t
ORIGIN
1 aggaggctct gtacctgcag tgctgctttt cttgcctaga ctctaggaac tatccgagct
61 ccactcccca caacatactc aaaggaacgg agagaaccgg gacccccctg cggggacccg
121 gaactgatct gacaggatgg catctgatga ctttgacata gtgattgagg ccatgctgga
181 agctccctat aaaaaagaag aggatgagca acaaaggaaa gaagttaaaa aggattatcc
241 tagcaatacc accagcagca ccagcaacag tggcaatgag accagtggaa gcagcaccat
301 cggggagaca agcaatcgta gtcgagatcg ggatcggtat agacggagaa atagtcggag
361 ccgaagtcca ggtcggcagt gtcgtcaccg tagccgtagc tgggatcgtc gacatggtag
421 tgagtcgcga agtcgggacc atcgtcgtga ggatcgtgtg cattacagga gtcctccact
481 tgccactggt tataggtatg gacacagtaa gagtcctcat ttcagagaga agagcccagt
541 cagggagcca gttgataatc tgagtcctga ggagcgtgat gcccgcacag ttttctgtat
601 gcagttagct gcccgaattc ggcctcgaga tctggaggac tttttctctg ctgtaggcaa
661 ggttcgcgat gtacgtatca tctcagatcg gaactcacgt cgttctaagg gcattgccta
721 cgtggaattc tgtgaaatcc agtctgtgcc actggccatt gggctgactg ggcagcggtt
781 gctgggagtg cctatcattg tacaggcttc acaggcagag aaaaaccgac tggcagccat
841 ggccaacaac ctgcaaaagg gcaatggtgg accaatgcgc ctctatgtgg gttccctgca
901 cttcaatatc actgaagaca tgctccgggg catctttgag ccctttggta aaattgataa
961 tattgtcctg atgaaggact cagatacagg ccgctctaaa ggttatggtt tcatcacgtt
1021 ctctgattct gagtgtgccc ggcgggccct ggaacagttg aatgggtttg agcttgctgg
1081 tcgacctatg agggttggcc atgtgactga gcgactggat ggtggcacag acatcacttt
1141 tcctgatggg gaccaggagc tggatctggg atcagcaggt ggacgttttc agctcatggc
1201 aaagctggca gaaggcgctg gaatccaact gccaagcact gctgctgctg ctgctgccgc
1261 cgccgcccag gctgctgcct tgcaactgaa tggagcagtt cccttggggg ccctgaatcc
1321 agcagctctg actgctctga gtccagccct gaaccttgcc tcccagtgtt tccagctctc
1381 cagcctcttt accccccaga ccatgtaaat cagtggcaca gtatactgcc tccttgtgcc
1441 tctggatcct gccacttcac atctactctt ccatggcccc atttctccat tttgtggacc
1501 aagccatcct gagggcatgg acattgtctc tgaggaaatt ggggccaccc ttaagatacc
1561 aagaaaagct cctgcccatg gtcccactgg aaatggactc tgctgagcaa agccaccagt
1621 tgaagagaac agaatccaca cctgcattga atacctgttt ctccatgtgt atcgtctctg
1681 agattacctt cttgcccttt ccaacacctt agtgattcct caatttctcc cccattggga
1741 aggccatagg gcattaactg aaggaactga cctctctcct tttcctgtac ctttaacctt
1801 tagtctgtca aggaaaaccc ttaggacctc tgaatcaaga ggactgagtt tgtgggtgaa
1861 ccttgaaggt gctctttctg ctacaagggc cctgggagat agcatggacg tgcattgaga
1921 agccagcctc agaccttagc ttgaagcagc ttgaggccag acctactgta gcctcagcat
1981 cttgctagga ggcatggaag tgatctatcc tgccaggagg cctcagagtg atctgtcctg
2041 ccaggaggtg tgagagtgat ctgtcctgtg aggcatttag gggctttcag gaatttagta
2101 aaaggtggag tatgcctttc cagtatcttc catcttcctt tgtatacttg tccttcctcc
2161 catttcctcc ctttggcccg aggtaggagg atggagggag gctgctactc taccacttcc
2221 tgtgtgcctc tactgtggcc tcaaccctgg caattatagc tactcccatc ccttacctgg
2281 gcatgtgtga gcccttctca ctggatttta tacccttgtg tctgtgtaca taaatatata
2341 tacatatata tatatatata aaaactttgt acaaaaggca agcctcaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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