LOCUS BC024045 3207 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens karyopherin (importin) beta 1, mRNA (cDNA clone
MGC:2157 IMAGE:3356550), complete cds.
ACCESSION BC024045
VERSION BC024045.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3207)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3207)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24797084.
FEATURES Location/Qualifiers
source 1..3207
/db_xref="H-InvDB:HIT000050880"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2157 IMAGE:3356550"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3207
/gene="KPNB1"
/gene_synonym="IMB1"
/gene_synonym="Impnb"
/gene_synonym="IPOB"
/gene_synonym="MGC2155"
/gene_synonym="MGC2156"
/gene_synonym="MGC2157"
/gene_synonym="NTF97"
/db_xref="GeneID:3837"
/db_xref="HGNC:HGNC:6400"
/db_xref="MIM:602738"
CDS 282..2912
/gene="KPNB1"
/gene_synonym="IMB1"
/gene_synonym="Impnb"
/gene_synonym="IPOB"
/gene_synonym="MGC2155"
/gene_synonym="MGC2156"
/gene_synonym="MGC2157"
/gene_synonym="NTF97"
/codon_start=1
/product="karyopherin (importin) beta 1"
/protein_id="AAH24045.1"
/db_xref="GeneID:3837"
/db_xref="HGNC:HGNC:6400"
/db_xref="MIM:602738"
/translation="MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVL
ANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTE
TYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQD
IDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFI
MQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVA
LQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQD
ENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGC
ILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLA
PLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQ
KLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMES
HIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGV
QEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQ
SNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQ
QASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFIL
SFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTN
KAKTLATWATKELRKLKNQA"
BASE COUNT 900 a 740 c 822 g 745 t
ORIGIN
1 tctccctccg cctcccgagc accagcgcgc tctgagctgc ccccagggtc cctcccccgc
61 cgccagcagc ccatttggag ggaggaagta agggaagagg agaggaaggg gagccggacc
121 gactacccag acagagccgg tgaatgggtt tgtggtgacc cccgcccccc accccaccct
181 cccttcccac ccgaccccca acccccatcc ccagttcgag ccgccgcccg aaaggccggg
241 ccgtcgtctt aggaggagtc gccgccgccg ccacctccgc catggagctg atcaccattc
301 tcgagaagac cgtgtctccc gatcggctgg agctggaagc ggcgcagaag ttcctggagc
361 gtgcggccgt ggagaacctg cccactttcc ttgtggaact gtccagagtg ctggcaaatc
421 caggaaacag tcaggttgcc agagttgcag ctggtctaca aatcaagaac tctttgacat
481 ctaaagatcc agatatcaag gcacaatatc agcagaggtg gcttgctatt gatgctaatg
541 ctcgacgaga agtcaagaac tatgttttgc agacattggg tacagaaact taccggccta
601 gttctgcctc acagtgtgtg gctggtattg cttgtgcaga gatcccagta aaccagtggc
661 cagaactcat tcctcagctg gtggccaatg tcacaaaccc caacagcaca gagcacatga
721 aggagtcgac attggaagcc atcggttata tttgccaaga tatagaccca gagcagctac
781 aagataaatc caatgagatt ctgactgcca taatccaggg gatgaggaaa gaagagccta
841 gtaataatgt gaagctagct gctacgaatg cactcctgaa ctcattggag ttcaccaaag
901 caaactttga taaagagtct gaaaggcact ttattatgca ggtggtctgt gaagccacac
961 agtgtccaga tacgagggta cgagtggctg ctttacagaa tctggtgaag ataatgtcct
1021 tatattatca gtacatggag acatatatgg gtcctgctct ttttgcaatc acaatcgaag
1081 caatgaaaag tgacattgat gaggtggctt tacaagggat agaattctgg tccaatgtct
1141 gtgatgagga aatggatttg gccattgaag cttcagaggc agcagaacaa ggacggcccc
1201 ctgagcacac cagcaagttt tatgcgaagg gagcactaca gtatctggtt ccaatcctca
1261 cacagacact aactaaacag gacgaaaatg atgatgacga tgactggaac ccctgcaaag
1321 cagcaggggt gtgcctcatg cttctggcca cctgctgtga agatgacatt gtcccacatg
1381 tcctcccctt cattaaagaa cacatcaaga acccagattg gcggtaccgg gatgcagcag
1441 tgatggcttt tggttgtatc ttggaaggac cagagcccag tcagctcaaa ccactagtta
1501 tacaggctat gcccacccta atagaattaa tgaaagaccc cagtgtagtt gttcgagata
1561 cagctgcatg gactgtaggc agaatttgtg agctgcttcc tgaagctgcc atcaatgatg
1621 tctacttggc tcccctgcta cagtgtctga ttgagggtct cagtgctgaa cccagagtgg
1681 cttcaaatgt gtgctgggct ttctccagtc tggctgaagc tgcttatgaa gctgcagacg
1741 ttgctgatga tcaggaagaa ccagctactt actgcttatc ttcttcattt gaactcatag
1801 ttcagaagct cctagagact acagacagac ctgatggaca ccagaacaac ctgaggagtt
1861 ctgcatatga atctctgatg gaaattgtga aaaacagtgc caaggattgt tatcctgctg
1921 tccagaaaac gactttggtc atcatggaac gactgcaaca ggttcttcag atggagtcac
1981 atatccagag cacatccgat agaatccagt tcaatgacct tcagtcttta ctctgtgcaa
2041 ctcttcagaa tgttcttcgg aaagtgcaac atcaagatgc tttgcagatc tctgatgtgg
2101 ttatggcctc cctgttaagg atgttccaaa gcacagctgg gtctggggga gtacaagagg
2161 atgccctgat ggcagttagc acactggtgg aagtgttggg tggtgaattc ctcaagtaca
2221 tggaggcctt taaacccttc ctgggcattg gattaaaaaa ttatgctgaa taccaggttt
2281 gtttggcagc tgtgggctta gtgggagact tgtgccgtgc cctgcaatcc aacatcatac
2341 ctttctgtga cgaggtgatg cagctgcttc tggaaaattt ggggaatgag aacgtccaca
2401 ggtctgtgaa gccgcagatt ctgtcagtgt ttggtgatat tgcccttgct attggaggag
2461 agtttaaaaa atacttagag gttgtattga atactcttca gcaggcctcc caagcccagg
2521 tggacaagtc agactatgac atggtggatt atctgaatga gctaagggaa agctgcttgg
2581 aagcctatac tggaatcgtc cagggattaa agggggatca ggagaacgta cacccggatg
2641 tgatgctggt acaacccaga gtagaattta ttctgtcttt cattgaccac attgctggag
2701 atgaggatca cacagatgga gtagtagctt gtgctgctgg actaataggg gacttatgta
2761 cagcatttgg gaaggatgta ctgaaattag tagaagctag gccaatgatc catgaattgt
2821 taactgaagg gcggagatcg aagactaaca aagcaaaaac ccttgctaca tgggcaacaa
2881 aagaactgag gaaactgaag aaccaagctt gatctgttac cattgggatg ataacctgag
2941 gacccccact ggaaatctcc catcttttga aaaacctgga agtgaggagt gtgcacggat
3001 gctgaatgtt tgggaatgag aggatgagtg agtgaggctt gaaaacacac cacattgaaa
3061 atcctgccac agcagcagcc gcagccgcca acagcagcgc tgttagtgag ctaagtaagc
3121 actgacttcg tagaaaacca taacatcggc catcttggaa aagagaaaaa caatggagtt
3181 acttatttaa aaaaaaaaaa aaaaaaa
//