LOCUS BC023665 1045 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LSM4 homolog, U6 small nuclear RNA associated (S.
cerevisiae), mRNA (cDNA clone MGC:29665 IMAGE:5015049), complete
cds.
ACCESSION BC023665
VERSION BC023665.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1045)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1045)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023665.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: l Column: 6.
FEATURES Location/Qualifiers
source 1..1045
/db_xref="H-InvDB:HIT000050866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29665 IMAGE:5015049"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1045
/gene="LSM4"
/gene_synonym="YER112W"
/db_xref="GeneID:25804"
/db_xref="HGNC:HGNC:17259"
/db_xref="MIM:607284"
CDS 45..464
/gene="LSM4"
/gene_synonym="YER112W"
/codon_start=1
/product="LSM4 homolog, U6 small nuclear RNA associated
(S. cerevisiae)"
/protein_id="AAH23665.1"
/db_xref="GeneID:25804"
/db_xref="HGNC:HGNC:17259"
/db_xref="MIM:607284"
/translation="MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVI
CTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGR
GMGGAGRGVFGGRGRGGIPGTGRGQPEKKPGRQAGKQ"
BASE COUNT 248 a 277 c 314 g 206 t
ORIGIN
1 ggcggcggcg gaagtggccg gcgagcccgg tccccgccgg caccatgctt cccttgtcac
61 tgctgaagac ggctcagaat caccccatgt tggtggagct gaaaaatggg gagacgtaca
121 atggacacct ggtgagctgc gacaactgga tgaacattaa cctgcgagaa gtcatctgca
181 cgtccaggga cggggacaag ttctggcgga tgcccgagtg ctacatccgc ggcagcacca
241 tcaagtacct gcgcatcccc gacgagatca tcgacatggt caaggaggag gtggtggcca
301 agggccgcgg ccgcggaggc ctgcagcagc agaagcagca gaaaggccgc ggcatgggcg
361 gcgctggccg aggtgtgttt ggtggccggg gccgaggtgg gatcccgggc acaggcagag
421 gccagccaga gaagaagcct ggcagacagg cgggcaaaca gtgagcgccc acccagaccg
481 gctgctgcgc cccctcctgc cagggtggcg attccgctcc acagtctcgg acggatctgc
541 tcagaaagga agaggcaggc gccaggggga acccccttcg tgttttgtga ccctcccttt
601 taggtgaagc ccctttttct tgctaaaacc ggcaattctc cggttagaaa tgttacttgg
661 tgttttttgg ttttgtgaaa cggccgtccc aaagctggct ggattcctag aagagtctgt
721 gttgaaggca tctttcaagc cctcgctctg gttctcaggg cagcattttc caggcgggtt
781 tgttttgcat ttcttggagc ctctccgagc agcaaccaga cgggagattt ttattttaag
841 ctgttcatgc tgggactgac agcctgcagg gtttccttgg gcgcggcccc aaaattgcct
901 tcaaaacaaa cccgggacgg ttgaaagcct tcgaaccgtg caggggatgc ctcgggccct
961 ggcccttcgc ttcctctctt gtgttatgga aataaaaaca aataaaacta aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaa
//