LOCUS BC023576 663 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens granulysin, mRNA (cDNA clone MGC:20639 IMAGE:4766109),
complete cds.
ACCESSION BC023576
VERSION BC023576.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 663)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023576.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: p Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7108343.
FEATURES Location/Qualifiers
source 1..663
/db_xref="H-InvDB:HIT000050834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20639 IMAGE:4766109"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..663
/gene="GNLY"
/gene_synonym="519"
/gene_synonym="D2S69E"
/gene_synonym="LAG-2"
/gene_synonym="lymphokine"
/gene_synonym="NKG5"
/gene_synonym="TLA519"
/db_xref="GeneID:10578"
/db_xref="HGNC:HGNC:4414"
/db_xref="MIM:188855"
CDS 4..441
/gene="GNLY"
/gene_synonym="519"
/gene_synonym="D2S69E"
/gene_synonym="LAG-2"
/gene_synonym="lymphokine"
/gene_synonym="NKG5"
/gene_synonym="TLA519"
/codon_start=1
/product="granulysin"
/protein_id="AAH23576.1"
/db_xref="GeneID:10578"
/db_xref="HGNC:HGNC:4414"
/db_xref="MIM:188855"
/translation="MATWALLLLAAMLLGNPGLVFSRLSPEYYDLARAHLRDEEKSCP
CLAQEGPQGDLLTKTQELGRDYRTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSR
WRDVCRNFMRRYQSRVTQGLVAGETAQQICEDLRLCIPSTGPL"
BASE COUNT 179 a 196 c 161 g 127 t
ORIGIN
1 accatggcta cctgggccct cctgctcctt gcagccatgc tcctgggcaa cccaggtctg
61 gtcttctctc gtctgagccc tgagtactac gacctggcaa gagcccacct gcgtgatgag
121 gagaaatcct gcccgtgcct ggcccaggag ggcccccagg gtgacctgtt gaccaaaaca
181 caggagctgg gccgtgacta caggacctgt ctgacgatag tccaaaaact gaagaagatg
241 gtggataagc ccacccagag aagtgtttcc aatgctgcga cccgggtgtg taggacgggg
301 aggtcacgat ggcgcgacgt ctgcagaaat ttcatgagga ggtatcagtc tagagttacc
361 cagggcctcg tggccggaga aactgcccag cagatctgtg aggacctcag gttgtgtata
421 ccttctacag gtcccctctg agccctctca ccttgtcctg tggaagaagc acaggctcct
481 gtcctcagat cccgggaacc tcagcaacct ctgccggctc ctcgcttcct cgatccagaa
541 tccactctcc agtctccctc ccctgactcc ctctgctgtc ctcccctctc acgagaataa
601 agtgtcaagc aagaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
661 aaa
//