LOCUS BC023561 2021 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens chromosome 7 open reading frame 27, mRNA (cDNA clone
IMAGE:4025532), partial cds.
ACCESSION BC023561
VERSION BC023561.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2021)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023561.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: h Column: 11.
FEATURES Location/Qualifiers
source 1..2021
/db_xref="H-InvDB:HIT000090786"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4025532"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2021
/gene="C7orf27"
/gene_synonym="MGC22916"
/db_xref="GeneID:221927"
CDS <1..1749
/gene="C7orf27"
/gene_synonym="MGC22916"
/codon_start=1
/product="C7orf27 protein"
/protein_id="AAH23561.2"
/db_xref="GeneID:221927"
/translation="LSPRVACLLERDPIPAAHSFVDLLLCVARSPVFSSSDGSLWETV
ARALSCLGPTHMGPLALGILKLEHCPQALRTQAFQVLLQPLACVLKATVQAPGPPGLL
DGTADDATTVDTLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVLR
LCDGSAAPASSVGGHLCGTLAGCVRVQRAALDFLGTLSQGTGPQELVTQALAVLLECL
ESPGSSPTVLKKAFQATLRWLLSSPKTPGCSDLGPLIPQFLRELFPVLQKRLCHPCWE
VRDSALEFLTQLSRHWGGQADFRCALLASEVPQLALQLLQDPESYVRASAVTAMGQLS
SQGLHAPTSPEHAEARQSLFLELLHILSVDSEGFPRRAVMQVFTEWLRDGHADAAQDT
EQFVATVLQAASRDLDWEVRAQGLELALVFLGQTLGPPRTHCPYAVALPEVAPAQPLT
EALRALCHVGLFDFAFCALFDCDRPVAQKSCDLLLFLRDKIASYSSLREARGSPNTAS
AEATLPRWRAGEQAQPPGDQEPEAVLAMLRSLDLEGLRSTLAESSDHVEKSPQSLLQD
MLATGGFLQGDEADCY"
misc_feature 907..1368
/gene="C7orf27"
/gene_synonym="MGC22916"
/note="Cnd1; Region: Non-SMC condensin subunit,
XCAP-D2/Cnd1. Condensin is a multi-subunit protein complex
that acts as an essential regulator of chromosome
condensation. It contains both SMC (structural maintenance
of chromosomes) and non-SMC subunits. This family
represents one of the non-SMC subunits, known as Cnd1 in
Schizosaccharomyces pombe, and XCAP-D2 in Xenopus laevis.
This subunit is phosphorylated at several sites by Cdc2.
This phosphorylation process increases the supercoiling
activity of condensin"
/db_xref="CDD:pfam04594"
BASE COUNT 372 a 676 c 619 g 354 t
ORIGIN
1 ctgagtcccc gcgtggcctg tctgctggag agagacccca tccccgccgc acactcgttc
61 gtggacctgc ttctctgtgt ggctcgttct cccgtgttca gttcttccga cggcagcctg
121 tgggagacag tggcgcgggc tctgagctgc ctgggtccca cccacatggg acccctggct
181 ttggggatcc tgaagctcga gcactgtcca caggcactga ggacccaggc cttccaggtc
241 cttctccagc ccctggcctg tgtcctgaag gccacggttc aggcccccgg acccccaggc
301 ttgctggacg ggacggcaga cgatgccacg acggtggaca cactcctggc ctccaagtcg
361 tcctgcgccg gcctcctgtg ccgcaccctg gctcacctgg aggagctgca gccgctgccc
421 cagcgccctt caccgtggcc ccaggcgtct ctactggggg ctacagtgac tgtcctgcgg
481 ctctgtgacg gctcggctgc ccctgcctcc agtgtggggg gccacctctg tgggaccctg
541 gcgggctgcg tccgggtcca gcgagcagcc ctcgacttcc tggggacgct gtcacagggg
601 acaggccccc aggagctggt gacgcaggcg cttgctgtcc tcctggagtg cctcgagagc
661 cccggctcca gccccacggt tctgaagaag gccttccagg ccacgctcag gtggctcctg
721 agctcaccca agacccccgg ctgctctgat ctcggccccc tcatcccgca gttcctcaga
781 gagctgttcc ctgtgctgca gaaacgcctg tgccacccct gctgggaggt gagggactcc
841 gccctcgagt tcctgaccca gctgagcagg cactggggag gacaggctga cttcagatgc
901 gcactcttgg cttcagaggt gcctcagctg gccctgcagc tcctccagga ccctgagagt
961 tatgtccgag cgagtgcagt gaccgccatg gggcagctgt ccagccaggg cctgcacgcc
1021 cccaccagcc ctgagcatgc agaggcccgg cagagcctgt tcctggagct cctgcacatc
1081 ctctccgtag actcggaggg cttcccacgg cgggcggtca tgcaagtctt cactgagtgg
1141 ctgcgggacg gccacgccga cgcggcccag gacacggagc agttcgtggc cactgtgctg
1201 caggcggcga gccgagacct ggactgggag gtccgcgccc agggcctgga gctggccctc
1261 gtgttcctgg gccagacttt ggggccgccg cgtacccact gcccctatgc cgtggcccta
1321 cccgaggtgg ccccagccca gccactcacc gaggcactga gggctctctg ccacgtgggg
1381 ctctttgact tcgccttttg tgccttgttt gactgcgacc gccctgtggc gcagaagtct
1441 tgtgacctcc ttctcttcct gagggacaag attgcttcct acagcagcct gcgggaggcc
1501 aggggcagcc ccaacactgc ctccgcagag gccaccctgc cgaggtggcg ggcgggtgag
1561 caggcccagc ccccagggga ccaggagcct gaggctgtgc tggccatgct caggtcccta
1621 gacctggagg gcctgcggag cacgctggcc gagagcagcg accacgtgga aaagagtccc
1681 cagtccctcc tgcaggacat gctggccacg ggaggcttcc tgcaggggga cgaggccgac
1741 tgctactgag cagaaccaga gtctgccact ggggctcagg accaagggag gcagcaccat
1801 gtccttctgt gggacactgc cagccccagg gctccagccc agcccggtgg atcctctggg
1861 gaagccagga ccaggagaga agcaaggtca agaaatccca cagtttgatg tattaaagaa
1921 atgacttatt tctactcaaa ataaatggca ttgaagtctt tctttaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//