LOCUS BC023021 2790 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens golgi autoantigen, golgin subfamily a, 5, mRNA (cDNA
clone MGC:29870 IMAGE:4999710), complete cds.
ACCESSION BC023021
VERSION BC023021.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2790)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2790)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30260187.
FEATURES Location/Qualifiers
source 1..2790
/db_xref="H-InvDB:HIT000039697"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29870 IMAGE:4999710"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2790
/gene="GOLGA5"
/gene_synonym="ret-II"
/gene_synonym="RFG5"
/db_xref="GeneID:9950"
/db_xref="HGNC:HGNC:4428"
/db_xref="MIM:606918"
CDS 165..2360
/gene="GOLGA5"
/gene_synonym="ret-II"
/gene_synonym="RFG5"
/codon_start=1
/product="golgi autoantigen, golgin subfamily a, 5"
/protein_id="AAH23021.1"
/db_xref="GeneID:9950"
/db_xref="HGNC:HGNC:4428"
/db_xref="MIM:606918"
/translation="MSWFVDLAGKAEDLLNRVDQGAATALSRKDNASNIYSKNTDYTE
LHQQNTDLIYQTGPKSTYISSAGDNIRNQKATILAGTANVKVGSRTPVEASHPVENAS
VPRPSSHFVRRKKSEPDDELLFDFLNSSQKEPTGRVEIRKEKGKTPVFQSSQTSSVSS
VNPSVTTIKTIEENSFGSQTHEAASNSDSSHEGQEESSKENVSSNAACPDHTPTPNDD
GKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEKWNADHSKS
DRMTRGLRAQVDDLTEAVAAKDSQLAVLKVRLQEADQLLSTRTEALEALQSEKSRIMQ
DQSEGNSLQNQALQTLQERLHEADATLKREQESYKQMQSEFAARLNKVEMERQNLAEA
ITLAERKYSDEKKRVDELQQQVKLYKLNLESSKQELIDYKQKATRILQSKEKLINSLK
EGSGFEGLDSSTASSMELEELRHEKEMQREEIQKLMGQIHQLRSELQDMEAQQVNEAE
SAREQLQDLHDQIAGQKASKQELETELERLKQEFHYIEEDLYRTKNTLQSRIKDRDEE
IQKLRNQLTNKTLSNSSQSELENRLHQLTETLIQKQTMLESLSTEKNSLVFQLERLEQ
QMNSASGSSSNGSSINMSGIDNGEGTRLRNVPVLFNDTETNLAGMYGKVRKAASSIDQ
FSIRLGIFLRRYPIARVFVIIYMALLHLWVMIVLLTYTPEMHHDQPYGK"
BASE COUNT 947 a 557 c 634 g 652 t
ORIGIN
1 ccggaagcgg tagcagggcc ccggcgggtc ggggaggagg tttactcagc ttgggccccc
61 tccgggccag ccgccgaggg ggcgcggccc aggacggcgg ctaggccgta gtgcagcctc
121 tccggagtcc tcaggtttgc caataggatt atcctgctgc catcatgtct tggtttgttg
181 atcttgctgg aaaggcagaa gatcttttaa accgagttga tcaaggggct gcaacagctc
241 tcagtaggaa agacaatgcc agcaacatat atagcaaaaa tactgactat actgaacttc
301 accagcaaaa tacagatttg atatatcaga ctggacctaa atctacgtat atttcatcag
361 caggtgataa cattcgaaat caaaaagcca ccatcttagc tggcactgca aatgtgaaag
421 taggatctcg gacaccagta gaggcctctc atcctgttga aaatgcatct gttcctaggc
481 cttcatccca ttttgtgcga agaaaaaagt cagaacctga tgatgagctg ctgtttgatt
541 ttcttaatag ttcacagaag gagcctaccg ggagggtgga aatcagaaag gaaaaaggca
601 agacacctgt ctttcagagc tctcagacat caagtgtcag ttctgtgaac cccagtgtaa
661 ccaccatcaa aaccattgaa gaaaattctt ttgggagcca aacccacgaa gctgccagta
721 actcagattc tagccatgaa ggtcaagagg aatcttcaaa ggaaaatgtg tcatcaaatg
781 ctgcctgccc tgaccacacc ccaacaccta atgatgatgg caaatcacat gaactgtcta
841 accttcgact ggagaatcag ctgctgagga atgaagttca gtctttaaat caagaaatgg
901 cctcgttact ccaaagatcc aaagagactc aagaagaatt aaacaaagca agagcaagag
961 ttgaaaagtg gaatgctgac cattcaaaga gtgatcgaat gactcgagga ctccgagccc
1021 aagtagatga cctgactgaa gctgtggctg caaaggattc ccagctggct gtactgaaag
1081 tgagactcca ggaagctgac cagctactga gtactcgcac agaagcatta gaggccttac
1141 agagtgaaaa atcacgaata atgcaggatc aaagtgaagg taacagcctg cagaatcaag
1201 ctctgcagac tcttcaggag agactgcatg aagcggatgc cactctgaag agagagcagg
1261 agagctataa acagatgcag agcgagtttg ctgcacgcct taataaagtg gaaatggaac
1321 gtcagaattt agcagaagca attacactgg ccgaaagaaa atactcagat gagaagaaga
1381 gggttgatga actgcagcag caagtcaagc tgtataagtt gaacttggag tcctctaagc
1441 aggaattaat tgactacaag caaaaagcta ctagaatact gcaatctaag gaaaaattga
1501 ttaacagctt gaaagaaggc tctggttttg aaggcctaga tagcagcact gccagtagca
1561 tggagctgga agaacttcgg catgagaaag agatgcagag ggaggaaata cagaagctga
1621 tgggccagat acatcagctc agatccgaat tacaggatat ggaggcacag caagttaatg
1681 aagcagaatc agcaagagaa cagttacagg atctgcatga ccaaatagct gggcagaaag
1741 catccaaaca agaactagag acagaactgg agcgactgaa gcaggagttc cactatatag
1801 aagaagatct ttatcgaaca aagaacacat tgcaaagcag aattaaagat cgagacgaag
1861 aaattcaaaa actcaggaat cagcttacca ataaaacttt aagcaatagc agtcagtctg
1921 agttagaaaa tcgactccat cagctaacag agactctcat ccagaaacag accatgctgg
1981 agagtctcag cacagaaaag aactccctgg tctttcaact ggagcgcctc gaacagcaga
2041 tgaactccgc ctctggaagt agtagtaatg ggtcttcgat taatatgtct ggaattgaca
2101 atggtgaagg cactcgtctg cgaaatgttc ctgttctttt taatgacaca gaaactaatc
2161 tggcaggaat gtacggaaaa gttcgcaaag ctgctagttc aattgatcag tttagtattc
2221 gcctgggaat ttttctccga agatacccca tagcgcgagt ttttgtaatt atatatatgg
2281 ctttgcttca cctctgggtc atgattgttc tgttgactta cacaccagaa atgcaccacg
2341 accaaccata tggcaaatga accaagccca gttgttgcag tgattggttg tctttttcta
2401 gacttgggat ctgcaagaag gccaattgcc taaaatttct gagaacagtg cacaagatta
2461 ttttatcact acaagctttt aactttttaa gttattgtac aagtattcta cctaaatctt
2521 ccaatttcct ttaaatggta agagttttta aaacagacaa taatttaaca agctcagctc
2581 tgctttatct gagtttagtg gtcctaatat atatgtagag aaagatggtg gggttgttca
2641 cctctgtaca gaccatctgt atgttaggtg acattgatta tgggttataa tcagggaaac
2701 taattgtatt tagtgacaaa aataaaaagt tttttttttt taaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//