LOCUS BC022977 2840 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic),
mRNA (cDNA clone IMAGE:4997762), partial cds.
ACCESSION BC022977
VERSION BC022977.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2840)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2840)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: k Column: 23.
FEATURES Location/Qualifiers
source 1..2840
/db_xref="H-InvDB:HIT000090721"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4997762"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2840
/gene="RAB3GAP1"
/gene_synonym="KIAA0066"
/gene_synonym="P130"
/gene_synonym="RAB3GAP"
/gene_synonym="RAB3GAP130"
/gene_synonym="WARBM1"
/db_xref="GeneID:22930"
/db_xref="MIM:602536"
CDS <1..1633
/gene="RAB3GAP1"
/gene_synonym="KIAA0066"
/gene_synonym="P130"
/gene_synonym="RAB3GAP"
/gene_synonym="RAB3GAP130"
/gene_synonym="WARBM1"
/codon_start=2
/product="RAB3GAP1 protein"
/protein_id="AAH22977.1"
/db_xref="GeneID:22930"
/db_xref="MIM:602536"
/translation="SEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQ
EFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGS
GQESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSE
VLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVID
EKGNVVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQK
PADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLE
EIIHQITNVEALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRG
HAGRIIHKLFVNAQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVP
RPAPYSKALPQRMYSVLTKEDFRLAGAFSSDTSFF"
BASE COUNT 811 a 554 c 700 g 775 t
ORIGIN
1 gagtgaagac tataatctct acaatcagtt caagtctgca ccatctgaca gtttaacata
61 caaactggct ttgtgtctct gtatgatcaa tttttaccat ggagggttga aaggagtggc
121 acacctctgg caggaatttg ttcttgaaat gcgtttccga tgggaaaaca actttctgat
181 tccaggatta gcaagtggac ccccagatct gaggtgttgt ttactgcatc agaaactaca
241 gatgttaaat tgttgtattg aaagaaagaa ggcacgtgat gaggggaaaa agacaagtgc
301 ttcagatgtc actaatatat atccagggga tgctggaaaa gcaggagacc agttggtgcc
361 agataatcta aaagaaacag ataaggaaaa gggagaggta ggaaaatctt gggattcctg
421 gagtgacagc gaagaagaat tttttgaatg cctaagtgat actgaagaac ttaaaggaag
481 tggacaagag agtggcaaga aaggaggacc taaggagatg gcaaatttaa ggccggaagg
541 acggctctat cagcatggga aacttacact gctgcataat ggagaacctc tctacattcc
601 agtaacccag gaaccagcac ctatgacaga agatctgcta gaagagcagt ctgaagtttt
661 agctaaatta ggtacatcgg cagagggggc tcaccttcga gcacgcatgc agagtgcctg
721 tctgctctca gatatggagt cttttaaggc agctaatcca ggttgctccc tggaagattt
781 tgtgaggtgg tattcacccc gggattatat tgaagaggag gtgattgatg aaaagggcaa
841 tgtggtgctg aaaggagaac tgagtgcccg gatgaagatt ccaagcaata tgtgggtaga
901 agcctgggaa acagctaagc caattcctgc tagaaggcaa aggagactct tcgatgatac
961 acgggaagca gaaaaggtgc tgcactatct ggcaatccag aaacctgcag accttgctcg
1021 gcacctgtta ccttgtgtga ttcatgcagc tgtactcaag gtaaaggaag aagaaagtct
1081 cgaaaacatt tcttcagtta agaagatcat aaagcagata atatcccatt ccagtaaagt
1141 tttgcacttc cccaatccag aagacaagaa attggaagaa atcattcacc agattactaa
1201 tgtggaagct ctcattgcca gagctcggtc actaaaagcc aagtttggaa ctgagaaatg
1261 tgaacaggag gaggaaaagg aagatcttga aaggtttgtg agttgcctgc tggagcagcc
1321 tgaagtgtta gtcaccggtg caggaagagg acatgctggc aggatcattc acaagctgtt
1381 tgtgaatgcc cagagggctg cagctatgac tccaccagag gaggaattga agagaatggg
1441 ctccccagag gaaagaaggc agaactccgt gtcagacttc ccaccccctg ctggccggga
1501 attcattttg cgcaccactg tgccgcgccc tgctccctac tccaaagctc tgcctcagcg
1561 gatgtacagt gttctcacca aagaggactt tagacttgca ggtgcctttt catcagatac
1621 ttccttcttc tgattcttct agcattactc gttggtggct tcagagacag tgctgcctcc
1681 tcctgaggga gggaaggtac cagggagaac ctgggaggtc ctggagaggg ccctgtccag
1741 ttgggtgatc aggaatcaaa ccagcatcgg aaagacttcc cagcaccaag cttgagctgt
1801 gtcgtttcgt ggagggggca gcgaggatgg gcttgagctg ttgagagatt tctgccctag
1861 agatggcctt tgtatatggg ggggtggtgg ggggacacaa acacatcaga cactccgtcc
1921 tcacactggc aggacggtgt tcatcgcatt ctcttctgtg accagcctct aggctagcgg
1981 ctgcattcgt ggtctgtgca aacacttcgt ggttctatat atcagcagca agtgtgcaaa
2041 ataaaggacc tgttaactca gatttctgga tattttggtg gtagcttcta gtcccagaat
2101 ctgtgttttt aaaatactac atgacattct gtctattcaa tcacctggtg gtcatctttc
2161 ttgtactaat taactgttga tgagcatttt ggatattcta ggagaaagcc tataatttca
2221 catagtttct ctttttcatg taactgtaac ctaaatgtat tacttctgat aaaactatat
2281 atcaaatgtc actgcaaatt agttttatat ctgtcatgtg agatttgtct tacttatttt
2341 tcttttggtt gccatggaag ttatggccct gaaaatcgtc tccctcccct tctcttgctg
2401 tacagcatgc gttctctttt tgtggttgct ggctgggtac tgtatttaat gaagtagaga
2461 atagcacttg caaaaataca gtcttggtac ctagagactg tcatgcagat agtataattt
2521 ggtatatgtg ctaatgcatt gagtagagga ttattttaac acactatttt gcttttgtat
2581 tttagttaaa ataatcgatg gggatgtgta gcccccccgt gtgaggatga catcaccaca
2641 tttctagttt catggagctc aagatgtctt gtgtctgtgt ggctagatgg cctctgcttg
2701 gtaatcttat ttttaggcct aaaattccca cttaaatcca aagtaaaaat ggttatactg
2761 aagcataaac cttgcctgtg taattttaaa aaattaatag agctgtgcaa accctgttat
2821 ttttgtaaaa aaaaaaaaaa
//