LOCUS BC022878 2862 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 5, mRNA (cDNA clone MGC:26575
IMAGE:4821619), complete cds.
ACCESSION BC022878
VERSION BC022878.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2862)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2862)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC022878.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569425.
FEATURES Location/Qualifiers
source 1..2862
/db_xref="H-InvDB:HIT000039671"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26575 IMAGE:4821619"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2862
/gene="ANKRD5"
/gene_synonym="dJ839B4.6"
/gene_synonym="FLJ21669"
/db_xref="GeneID:63926"
/db_xref="HGNC:HGNC:15803"
CDS 354..2684
/gene="ANKRD5"
/gene_synonym="dJ839B4.6"
/gene_synonym="FLJ21669"
/codon_start=1
/product="ankyrin repeat domain 5"
/protein_id="AAH22878.1"
/db_xref="GeneID:63926"
/db_xref="HGNC:HGNC:15803"
/translation="MALADKGLENLQIYKVLQCVRNKDKKQIEKLTKLGYPELINYTE
PINGLSALHLASVSNDIDMVSFLLDLGAHPDVQDRMGCTPTMRAAELGHELSMEILAK
AKADMTIVDNEGKGVLFYCILPTKRHYRCALIALEHGADVNNSTYEGKPIFLRACEDA
HDVKDVCLTFLEKGANPNAINSSTGRTALMEASREGVVEIVRGILERGGEVNAFDNDR
HHAAHFAAKGGFFDILKLLFAYNGDVGLISINGNTPLHYAAMGGFADCCKYIAQRGCD
LKWKNLDHKTPRAVAKEGGFKAASKEIRRAERIANKLARPGAKNPNPLWALRLHDWSV
EREAFLREAFAVLDRGDGSISKNDFVMVLEERQDYASSEQLAAIAHLHEKTRGGGVNI
NEFFKGTRYLNKSFVLGSYGPKKKEKGMGKKGKKGKFVLPLPICVIPEYAFPRRQDGG
PPYYMIETYKNVTDSSRFNRDHPPEHPIQDDSVWYIDDSEKVFSNINIITKAGDLASL
KKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLWTPLHFAC
HAGQQDIVELLVESGALIDAASINNSTPLNRAIESCRLDTVKYLLDIGAKFQLENRKG
HSAMDVAKAYADYRIIDLIKEKLDNLPKPAENQKLKGKTPPILKTEGPEIKKEEELLS
SIYGVPTTSEGKKVQKGNVVHLNSLITSGYTKKVDITFIPRRIWSPEATTAELIRKRE
LRRERFTHEVDFDDFMMPFQKNITEKARALEAALKT"
BASE COUNT 890 a 590 c 697 g 685 t
ORIGIN
1 gggggcccgg ggcccatgga cacacacacc cagccctgct gtcccgcgcg ccagctcacc
61 agccctaccc aagggacatc attcacgcct gggcgcctcc gccgggctcc gggagcccaa
121 ggtcgcggct gggccagcgc tgagcgtcag aggacgagag caggggcctc cccggtcgcc
181 ccagcaggcc caggcacata ggtgcccaga gatccctggc ttctgatcgc ccggaagact
241 aagagtccca tgaagtgggc accattgcta ttgccagttc acagatgcag aaactgaggt
301 aaaaactagc tttagttttg gtccagaaag cattttcaag gagctggtca agcatggctt
361 tagcagataa gggacttgag aacttacaga tctacaaagt tcttcaatgt gtgcggaaca
421 aagacaagaa gcagatagag aagctgacca agcttggata ccctgaacta atcaattata
481 cagaacccat taatgggctt agtgctttgc acttagcctc agtttccaat gatattgata
541 tggtcagctt tctccttgac cttggtgctc accctgatgt gcaagaccga atgggctgta
601 ctcccacaat gagggctgca gaactgggcc atgaattgtc aatggaaata ttagcaaagg
661 caaaggctga tatgactata gttgataatg aaggaaaagg tgttttgttt tactgcattt
721 taccgactaa gcggcattat cgctgtgctc tgatcgccct tgaacatggt gcagatgtca
781 acaattctac ctatgaagga aagccaatat tccttagagc ttgtgaagat gcacatgatg
841 ttaaagatgt gtgcctgaca tttttggaaa aaggagccaa tcctaatgca atcaactcat
901 ccacaggccg cacagcttta atggaagcgt caagagaagg ggtagtggaa atagttcgag
961 gcatattgga aagaggaggt gaagtgaatg catttgacaa cgacaggcat cacgctgctc
1021 attttgctgc taaaggaggc tttttcgata tattgaagct tctttttgcc tacaatggag
1081 acgtggggct gatttcgata aatgggaaca caccacttca ttatgctgcc atgggtggtt
1141 ttgcagactg ctgtaaatat atagctcagc gaggatgtga cctgaaatgg aagaatttag
1201 atcataaaac gcccagggct gtggctaagg aaggcggctt caaagcagca agcaaagaaa
1261 tacgccgagc agagagaatc gctaataaac tagccaggcc aggagccaaa aatccaaatc
1321 cactgtgggc ccttagactg cacgattggt ccgtagaacg tgaggctttc ctccgggaag
1381 cctttgcggt tttagacagg ggtgatggaa gcatcagcaa gaacgacttc gtgatggtgt
1441 tggaggaaag gcaggattat gcaagctcag aacagctggc tgccatcgct caccttcatg
1501 agaaaacccg gggaggaggg gtcaatatta atgaattctt taaaggaacc agatatttaa
1561 acaagtcttt tgtcttagga tcgtatggac ctaagaaaaa ggaaaaaggg atgggcaaaa
1621 aaggaaagaa agggaaattt gtcttacccc ttccaatctg tgtcattcct gagtacgcgt
1681 ttccacgccg gcaggatggt gggccaccgt attacatgat tgagacctac aagaatgtca
1741 ctgatagcag ccggtttaat agagatcatc ccccagaaca tcccattcag gatgactctg
1801 tttggtacat tgatgattca gagaaggtat tttcaaacat taatattatc accaaagcag
1861 gggatctggc ttctctgaaa aaggcctttg aatcaggaat acctgtggat atgaaggata
1921 attattacaa aactccgcta atgacggcgt gtgcaagtgg aaacatagat gtggtcaagt
1981 ttcttcttga aaaaggagct aacgttaatg caacagataa ctttctgtgg actccacttc
2041 attttgcatg ccatgcaggc caacaagaca ttgttgagct tcttgttgaa tctggagctt
2101 taatagatgc agcttcaatc aacaactcaa ctcctttaaa tagagccatt gaaagctgca
2161 gactggatac agtaaaatac ctacttgata ttggtgctaa attccagctg gaaaatagaa
2221 aagggcatag tgccatggac gttgcaaagg catatgctga ttatagaata attgatctga
2281 ttaaagaaaa gctagataac ttgccgaaac cagcagaaaa tcaaaaacta aaaggcaaga
2341 cacctcctat actgaagact gaaggccctg aaattaagaa agaagaggaa ctgctgtcat
2401 caatttatgg tgtaccaacc acatcagagg gaaagaaagt acagaagggt aatgtggttc
2461 atctgaattc attgattacc agtggttata ctaagaaagt ggatatcaca tttattccac
2521 ggaggatttg gagtcctgaa gccacaacag cagagctgat caggaagagg gaactacggc
2581 gagagaggtt tacacatgag gtggacttcg acgattttat gatgcctttt cagaagaaca
2641 tcacagagaa agctcgagca ctggaagctg ccttgaagac ctaagtcata gcagttattt
2701 cttggggtaa atgctttgag gcccagggac caatctttgg agaaagtaga tatttccatc
2761 aaagccaaag caatccatac accaagaact tgttaccaag aatttctttt tgctttaaca
2821 actataaata ttcttagctg tctagaaaaa aaaaaaaaaa aa
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