LOCUS BC022820 928 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glutathione peroxidase 2 (gastrointestinal), mRNA
(cDNA clone MGC:39263 IMAGE:5429926), complete cds.
ACCESSION BC022820
VERSION BC022820.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 928)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 928)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: o Column: 7.
FEATURES Location/Qualifiers
source 1..928
/db_xref="H-InvDB:HIT000090674"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39263 IMAGE:5429926"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..928
/gene="GPX2"
/gene_synonym="GI-GPx"
/gene_synonym="GPRP"
/gene_synonym="GSHPx-2"
/gene_synonym="GSHPX-GI"
/db_xref="GeneID:2877"
/db_xref="HGNC:HGNC:4554"
/db_xref="MIM:138319"
CDS 3..575
/gene="GPX2"
/gene_synonym="GI-GPx"
/gene_synonym="GPRP"
/gene_synonym="GSHPx-2"
/gene_synonym="GSHPX-GI"
/codon_start=1
/transl_except=(pos:120..122,aa:Sec)
/product="glutathione peroxidase 2 (gastrointestinal)"
/protein_id="AAH22820.2"
/db_xref="GeneID:2877"
/db_xref="HGNC:HGNC:4554"
/db_xref="MIM:138319"
/translation="MAFIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTT
RDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLV
QKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIG
PEGEPFRRYSRTFPTINIEPDIKRLLKVAI"
BASE COUNT 218 a 272 c 223 g 215 t
ORIGIN
1 ccatggcttt cattgccaag tccttctatg acctcagtgc catcagcctg gatggggaga
61 aggtagattt caatacgttc cggggcaggg ccgtgctgat tgagaatgtg gcttcgctct
121 gaggcacaac cacccgggac ttcacccagc tcaacgagct gcaatgccgc tttcccaggc
181 gcctggtggt ccttggcttc ccttgcaacc aatttggaca tcaggagaac tgtcagaatg
241 aggagatcct gaacagtctc aagtatgtcc gtcctggggg tggataccag cccaccttca
301 cccttgtcca aaaatgtgag gtgaatgggc agaacgagca tcctgtcttc gcctacctga
361 aggacaagct cccctaccct tatgatgacc cattttccct catgaccgat cccaagctca
421 tcatttggag ccctgtgcgc cgctcagatg tggcctggaa ctttgagaag ttcctcatag
481 ggccggaggg agagcccttc cgacgctaca gccgcacctt cccaaccatc aacattgagc
541 ctgacatcaa gcgcctcctt aaagttgcca tatagatgtg aactgctcaa cacacagatc
601 tcctactcca tccagtcctg aggagcctta ggatgcagca tgccttcagg agacactgct
661 ggacctcagc attcccttga tatcagtccc cttcactgca gagccttgcc tttcccctct
721 gcctgtttcc ttttcctctc ccaaccctct ggttggtgat tcaacttggg ctccaagact
781 tgggtaagct ctgggccttc acagaatgat ggcaccttcc taaaccctca tgggtggtgt
841 ctgagaggcg tgaagggcct ggagccactc tgctagaaga gaccaataaa gggcaggtgt
901 ggaaacggcc aaaaaaaaaa aaaaaaaa
//