LOCUS BC022816 1056 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide A', mRNA
(cDNA clone MGC:39248 IMAGE:4904205), complete cds.
ACCESSION BC022816
VERSION BC022816.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1056)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1056)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50593001.
FEATURES Location/Qualifiers
source 1..1056
/db_xref="H-InvDB:HIT000039644"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39248 IMAGE:4904205"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1056
/gene="SNRPA1"
/db_xref="GeneID:6627"
/db_xref="HGNC:HGNC:11152"
/db_xref="MIM:603521"
CDS 58..825
/gene="SNRPA1"
/codon_start=1
/product="small nuclear ribonucleoprotein polypeptide A'"
/protein_id="AAH22816.1"
/db_xref="GeneID:6627"
/db_xref="HGNC:HGNC:11152"
/db_xref="MIM:603521"
/translation="MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQF
DAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVE
LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEK
MFKGKRGAQLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVE
RLKGLLQSGQIPGRERRSGPTDDGEEEMEEDTVTNGS"
BASE COUNT 329 a 204 c 273 g 250 t
ORIGIN
1 gtctcgctgg cgggaggccc gggctttcca cagcgcgggg gaacgggagg ctgcaggatg
61 gtcaagctga cggcggagct gatcgagcag gcggcgcagt acaccaacgc ggtgcgcgac
121 cgggagctgg acctccgggg gtataaaatt cccgtcattg aaaatctagg tgctacgtta
181 gaccagtttg atgctattga tttttctgac aatgagatca ggaaactgga tggttttcct
241 ttgttgagaa gactgaaaac attgttagtg aacaacaaca gaatatgccg tataggtgag
301 ggacttgatc aggctctgcc ctgtctgaca gaactcattc tcaccaataa tagtctcgtg
361 gaactgggtg atctggaccc tctggcatct ctcaaatcgc tgacttacct aagtatccta
421 agaaatccgg taaccaataa gaagcattac agattgtatg tgatttataa agttccgcaa
481 gtcagagtac tggatttcca gaaagtgaaa ctaaaagagc gtcaggaagc agagaaaatg
541 ttcaagggca aacggggtgc acagcttgca aaggatattg ccaggagaag caaaactttt
601 aatccaggtg ctggtttgcc aactgacaaa aagaaaggtg ggccatctcc aggggatgta
661 gaagcaatca agaatgccat agcaaatgct tcaactctgg ctgaagtgga gaggctgaag
721 gggttgctgc agtctggtca gatccctggc agagaacgca gatcagggcc cactgatgat
781 ggtgaagaag agatggaaga agacacagtc acaaacgggt cctgagcagt gaggcagatg
841 tataataata ggccctcttg gaacaagtct tgcttttcga acatggtata atagccttgt
901 ttgtgttagc aaagtggaat ctatcagcat tgttgaaatg cttaagactg ctgctgataa
961 ttttgtaata taagttttga aatctaaatg tcaattttct acaaattata aaaataaact
1021 ccactcacta tgctaccaaa aaaaaaaaaa aaaaaa
//