LOCUS BC022500 2305 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens leucine-rich, glioma inactivated 1, mRNA (cDNA clone
MGC:26441 IMAGE:4811956), complete cds.
ACCESSION BC022500
VERSION BC022500.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4826815.
FEATURES Location/Qualifiers
source 1..2305
/db_xref="H-InvDB:HIT000039583"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26441 IMAGE:4811956"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2305
/gene="LGI1"
/gene_synonym="ETL1"
/gene_synonym="IB1099"
/db_xref="GeneID:9211"
/db_xref="HGNC:HGNC:6572"
/db_xref="MIM:604619"
CDS 261..1934
/gene="LGI1"
/gene_synonym="ETL1"
/gene_synonym="IB1099"
/codon_start=1
/product="leucine-rich, glioma inactivated 1"
/protein_id="AAH22500.1"
/db_xref="GeneID:9211"
/db_xref="HGNC:HGNC:6572"
/db_xref="MIM:604619"
/translation="MESERSKRMGNACIPLKRIAYFLCLLSALLLTEGKKPAKPKCPA
VCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLLLFTSNS
FDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFK
GLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLSSKD
FDCIITEFAKSQDLPYQSLSIDTFSYLNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYD
NITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPND
IETFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIVRTPQ
TLRTPHLILSSSSQRPVIYQWNKATQLFTNQTDIPNMEDVYAVKHFSVKGDVYICLTR
FIGDSKVMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYNWDAEK
AKFVKFQELNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA"
BASE COUNT 711 a 485 c 441 g 668 t
ORIGIN
1 gtggtgatgc aagtcggctc tctcctccag cagttggatc cctcccatct cacagtacct
61 cacaggtctc ttcccccgag cagtgcattg ctggagcgag gagaagctca cgaatcagct
121 gcaggtctct gttttgaaaa agcagagata cagaggcaga ggaaaagggt ggactcctat
181 gtgacctgtt cttagagcaa gacaatcacc atctgaattc cagaagccct gttcatggtt
241 ggggatattt tctcgactgc atggaatcag aaagaagcaa aaggatggga aatgcctgca
301 ttcccctgaa aagaattgct tatttcctat gtctcttatc tgcgcttttg ctgactgagg
361 ggaagaaacc agcgaagcca aaatgccctg ccgtgtgtac ttgtaccaaa gataatgctt
421 tatgtgagaa tgccagatcc attccacgca ccgttcctcc tgatgttatc tcattatcct
481 ttgtgagatc tggttttact gaaatctcag aagggagttt tttattcacg ccatcgctgc
541 agctcttgtt attcacatcg aactcctttg atgtgatcag tgatgatgct tttattggtc
601 ttccacatct agagtattta ttcatagaaa acaacaacat caagtcaatt tcaagacata
661 ctttccgggg actaaagtca ttaattcact tgagccttgc aaacaacaat ctccagacac
721 tcccaaaaga tattttcaaa ggcctggatt ctttaacaaa tgtggacctg aggggtaatt
781 catttaattg tgactgtaaa ctgaaatggc tagtggaatg gcttggccac accaatgcaa
841 ctgttgaaga catctactgc gaaggccccc cagaatacaa gaagcgcaaa atcaatagtc
901 tctcctcgaa ggatttcgat tgcatcatta cagaatttgc aaagtctcaa gacctgcctt
961 atcaatcatt gtccatagac actttttctt atttgaatga tgagtatgta gtcatcgctc
1021 agccttttac tggaaaatgc attttccttg aatgggacca tgtggaaaag accttccgga
1081 attatgacaa cattacaggc acatccactg tagtatgcaa gcctatagtc attgaaactc
1141 agctctatgt tattgtggcc cagctgtttg gtggctctca catctataag cgagacagtt
1201 ttgcaaataa attcataaaa atccaggata ttgaaattct caaaatccga aaacccaatg
1261 acattgaaac attcaagatt gaaaacaact ggtactttgt tgttgctgac agttcaaaag
1321 ctggttttac taccatttac aaatggaacg gaaacggatt ctactcccat caatccttac
1381 acgcgtggta cagggacact gatgtggaat atctagaaat agtcagaaca cctcagacac
1441 tcagaacgcc tcatttaatt ctgtctagta gttcccagcg tcctgtaatt tatcagtgga
1501 acaaagcaac acaattattc actaaccaaa ctgacattcc taacatggag gatgtgtacg
1561 cagtgaagca cttctcagtg aaaggggacg tgtacatttg cttgacaaga ttcattggtg
1621 attccaaagt catgaaatgg ggaggctcct cgttccagga tattcagagg atgccatcgc
1681 gaggatccat ggtgttccag cctcttcaaa taaataatta ccaatatgca attcttggaa
1741 gtgattactc ctttactcaa gtgtataact gggatgcaga gaaagccaaa tttgtgaaat
1801 ttcaggaatt aaatgttcag gcaccaagat cattcacaca tgtgtccatt aataagcgta
1861 attttctttt tgcttccagt tttaagggaa atacacagat ttacaaacat gtcatagttg
1921 acttaagcgc atgagacacc aaattctgtg gctgccatca gaaattttct acagtacatg
1981 acccggatga actcaatgca tgatgactct tcttatcaca cttgcaaatg aatgcctttc
2041 aaacattgag actgctagaa ccaagcacta ccagtatctc catccttaac tgtccagtcc
2101 agtgatgtgg gaagttacct tttataagac aaaatttaat tgtgtaactg ttctttgcag
2161 tgaagatgtg taaataagcg tttaatggta tctgttactc caaaaagaaa tattaatatg
2221 tacttttcca tttatttatt catgtgtaca gaaacaactg caaaataaaa tgtttacatt
2281 ttctttcata aaaaaaaaaa aaaaa
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