LOCUS BC022488 2381 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) A receptor, alpha 2,
mRNA (cDNA clone MGC:26342 IMAGE:4812001), complete cds.
ACCESSION BC022488
VERSION BC022488.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2381)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2381)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557600.
FEATURES Location/Qualifiers
source 1..2381
/db_xref="H-InvDB:HIT000039577"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26342 IMAGE:4812001"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2381
/gene="GABRA2"
/db_xref="GeneID:2555"
/db_xref="MIM:137140"
CDS 154..1257
/gene="GABRA2"
/codon_start=1
/product="GABRA2 protein"
/protein_id="AAH22488.1"
/db_xref="GeneID:2555"
/db_xref="MIM:137140"
/translation="MKTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTR
ILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERL
KFKGPMNILRLNNLMASKIWTPDTFFHNGKKSAAHNMTMPNKLLRIQDDGTLLYTMRL
TVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQY
DLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR
ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV
NYFTKRGWAWDGKSVVNDKVSESFRVIIIKKIP"
BASE COUNT 700 a 442 c 459 g 780 t
ORIGIN
1 aagcggcctc ggggagcagc ccgaggctgc gcgtgggctc cgctcctccg gcgaggtgtg
61 ggcgagggga gcggcgctcc gagcgcaccc aggcgcccga cgccgcccgg gtctgcgccg
121 ctgctagtgc caggcgggcg acgagcggcg gtgatgaaga caaaattgaa catctacaac
181 atgcagttcc tgctttttgt tttcttggtg tgggaccctg ccaggttggt gctggctaac
241 atccaagaag atgaggctaa aaataacatt accatcttta cgagaattct tgacagactt
301 ctggatggtt acgataatcg gcttagacca ggactgggag acagtattac tgaagtcttc
361 actaacatct acgtgaccag ttttggccct gtctcagata cagatatgga atatacaatt
421 gatgttttct ttcgacaaaa atggaaagat gaacgtttaa aatttaaagg tcctatgaat
481 atccttcgac taaacaattt aatggctagc aaaatctgga ctccagatac cttttttcac
541 aatgggaaaa aatcagcagc tcataatatg acaatgccaa ataagttgct tcgaattcag
601 gatgatggga ctctgctgta taccatgagg cttacagttc aagctgaatg cccaatgcac
661 ttggaggatt tcccaatgga tgctcattca tgtcctctga aatttggcag ctatgcatat
721 acaacttcag aggtcactta tatttggact tacaatgcat ctgattcagt acaggttgct
781 cctgatggct ctaggttaaa tcaatatgac ctgctgggcc aatcaatcgg aaaggagaca
841 attaaatcca gtacaggtga atatactgta atgacagctc atttccacct gaaaagaaaa
901 attgggtatt ttgtgattca aacctatctg ccttgcatca tgactgtcat tctctcccaa
961 gtttcattct ggcttaacag agaatctgtg cctgcaagaa ctgtgtttgg agtaacaact
1021 gtcctaacaa tgacaactct aagcatcagt gctcggaatt ctctccccaa agtggcttat
1081 gcaactgcca tggactggtt tattgctgtt tgttatgcat ttgtgttctc tgccctaatt
1141 gaatttgcaa ctgttaatta cttcaccaaa agaggatggg cttgggatgg gaagagtgta
1201 gtaaatgaca aggtaagtga gagcttccgt gttatcatta ttaagaaaat accctaatga
1261 attccgcttg taacagatat gtttctaaaa tcctgacatt aaagacatcc atatatatat
1321 gaatttgaat catatcaatt tcttttaaag tgttcttgcc tgaaatcctt taggagttct
1381 tgtagtacta atacttccat taaaaccact ccgtagcatc tgttgagctg tatgtgtcag
1441 gcactgtgct aagtgtttta catatgctct ctcacataat ctttatagca tccttatgac
1501 tagactgcct tcttattctt atttttactc atgaagaatc tgaagcagta aagttatttt
1561 cttgcccaag cttacacaac ttgttagtaa gtatacttga actccgatct acctgtctga
1621 ctgttaagtt catggtttta acaccacact gcattattat aaagagatta gaaaaagaaa
1681 atgggcatta attttactta ttatagaatt ccaggctcta tcaatgaatt gaatcctctt
1741 cacctgttcc agtctctgct gatttattgt aaaagcccgg atagcatttt tttaaaatct
1801 ttcccatgtt gcatggaata aatatgtcgg tgctggaatg cttaggaatt ttaaattgtt
1861 catatggtct aaaagggaaa agttatttgt ttttaagatt aacttctttt gagattattg
1921 ctgtccatat ttaggtttca agtactgaat ctaatgggag atttgtgcat tgatataaca
1981 gctgtttcct ttcatactct gtagattatg tatctgccta aagggaggct ttgaatgtat
2041 cataatcatc tatattctta ataatggtaa aaagttgtat tcagaggata tctttaacat
2101 tgtatcaacc taaatgcttc ttttattaaa tttggattaa catacttgca gatttgattt
2161 ctttttcagt tatttgaata tattttttca tttctatgac catgttacag tttaaatata
2221 caagcagtaa atgttatagt ttaaaagtct tggtcttttt ccttaatttt gtaagccata
2281 gaaattttaa taagactgat tatttatttc attttataag ttgtgttttc cctactaacg
2341 gagccaacaa ataaatatta aaaggaaaaa aaaaaaaaaa a
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