LOCUS BC022439 645 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon induced transmembrane protein 3 (1-8U),
mRNA (cDNA clone MGC:24755 IMAGE:4282809), complete cds.
ACCESSION BC022439
VERSION BC022439.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 645)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 645)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: m Column: 16.
FEATURES Location/Qualifiers
source 1..645
/db_xref="H-InvDB:HIT000039539"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24755 IMAGE:4282809"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..645
/gene="IFITM3"
/gene_synonym="1-8U"
/db_xref="GeneID:10410"
/db_xref="HGNC:HGNC:5414"
/db_xref="MIM:605579"
CDS 51..452
/gene="IFITM3"
/gene_synonym="1-8U"
/codon_start=1
/product="interferon induced transmembrane protein 3
(1-8U)"
/protein_id="AAH22439.1"
/db_xref="GeneID:10410"
/db_xref="HGNC:HGNC:5414"
/db_xref="MIM:605579"
/translation="MNQTVQTFFSPVNSGQPPNYEMLKEEHEVAVLGAPHNPAPPTST
VIHIRSETSVPDHVVWSLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGDVTGAQAYAST
AKCLNIWALILGILMTILLIVIPVLIFQAYG"
BASE COUNT 152 a 215 c 141 g 137 t
ORIGIN
1 actgagaacc atcccagtaa cccgaccgcc gctggtcttc gctggacacc atgaatcaaa
61 ctgtccaaac cttcttctct cctgtcaaca gcggccagcc ccccaactat gagatgctca
121 aggaggagca cgaggtggct gtgctggggg cgccccacaa ccctgctccc ccgacgtcca
181 ccgtgatcca catccgcagc gagacctccg tgcccgacca tgtcgtctgg tccctgttca
241 acaccctctt catgaacccc tgctgcctgg gcttcatagc attcgcctac tccgtgaagt
301 ctagggacag gaagatggtt ggcgacgtga ccggggccca ggcctatgcc tccaccgcca
361 agtgcctgaa catctgggcc ctgattctgg gcatcctcat gaccattctg ctcatcgtca
421 tcccagtgct gatcttccag gcctatggat agatcaggag gcatcactga ggccaggagc
481 tctgcccatg acctgtatcc cacgtactcc aacttccatt cctcgccctg cccccggagc
541 cgagtcctgt atcagccctt tatcctcaca cgcttttcta caatggcatt caataaagtg
601 cacgtgtttc tggttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//