LOCUS BC022295 2480 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens oxidized low density lipoprotein (lectin-like)
receptor 1, mRNA (cDNA clone MGC:22491 IMAGE:4722086), complete
cds.
ACCESSION BC022295
VERSION BC022295.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2480)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2480)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37595562.
FEATURES Location/Qualifiers
source 1..2480
/db_xref="H-InvDB:HIT000039453"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22491 IMAGE:4722086"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2480
/gene="OLR1"
/gene_synonym="CLEC8A"
/gene_synonym="LOX1"
/gene_synonym="SCARE1"
/db_xref="GeneID:4973"
/db_xref="HGNC:HGNC:8133"
/db_xref="MIM:602601"
CDS 56..877
/gene="OLR1"
/gene_synonym="CLEC8A"
/gene_synonym="LOX1"
/gene_synonym="SCARE1"
/codon_start=1
/product="oxidized low density lipoprotein (lectin-like)
receptor 1"
/protein_id="AAH22295.1"
/db_xref="GeneID:4973"
/db_xref="HGNC:HGNC:8133"
/db_xref="MIM:602601"
/translation="MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGV
LCLGLVVTIMVLGMQLSQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENEL
KEMIETLARKLNEKSKEQMELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSS
GSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPFWMGLSRRNPSYPWLWE
DGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ"
BASE COUNT 756 a 517 c 467 g 740 t
ORIGIN
1 agtttgttga agttcgtgac tgcttcactc tctcattctt agcttgaatt tggaaatgac
61 ttttgatgac ctaaagatcc agactgtgaa ggaccagcct gatgagaagt caaatggaaa
121 aaaagctaaa ggtcttcagt ttctttactc tccatggtgg tgcctggctg ctgcgactct
181 aggggtcctt tgcctgggat tagtagtgac cattatggtg ctgggcatgc aattatccca
241 ggtgtctgac ctcctaacac aagagcaagc aaacctaact caccagaaaa agaaactgga
301 gggacagatc tcagcccggc aacaagcaga agaagcttca caggagtcag aaaacgaact
361 caaggaaatg atagaaaccc ttgctcggaa gctgaatgag aaatccaaag agcaaatgga
421 acttcaccac cagaatctga atctccaaga aacactgaag agagtagcaa attgttcagc
481 tccttgtccg caagactgga tctggcatgg agaaaactgt tacctatttt cctcgggctc
541 atttaactgg gaaaagagcc aagagaagtg cttgtctttg gatgccaagt tgctgaaaat
601 taatagcaca gctgatctgg acttcatcca gcaagcaatt tcctattcca gttttccatt
661 ctggatgggg ctgtctcgga ggaaccccag ctacccatgg ctctgggagg acggttctcc
721 tttgatgccc cacttattta gagtccgagg cgctgtctcc cagacatacc cttcaggtac
781 ctgtgcatat atacaacgag gagctgttta tgcggaaaac tgcattttag ctgccttcag
841 tatatgtcag aagaaggcaa acctaagagc acagtgaatt tgaaggctct ggaagaaaag
901 aaaaaagtct ttgagtttta ttctggaatt taagctattc tttgtcactt gggtgccaaa
961 catgagagcc cagaaaactg tcatttagct ggctgcagaa ctcctttgca gaaactgggg
1021 ttccaggtgc ctggcacctt tatgtcaaca tttttgattc tagctatctg tattatttca
1081 cctagcttgt cccaagcttc cctgccagcc tgaagtccat tttccccttt ttattttaaa
1141 atttgactcc tcttcaagct tgaaaaccct ctgaactcag tcttctttac ctcattatca
1201 ccttcccctc acactcctaa aattgcatga aagacagaac atggagaact tgctcaagtg
1261 caggcagaga gcaaaaaggg gaaatatgtc tgggaaaaag tgcacgtgaa gaaacaaaga
1321 aggacagagg ccattccgaa atcaagaaac tcatgttctt aactttaaaa aaggtatcaa
1381 tccttggttt ttacactgtg gtccatctcc agactctacc acttacagac agacagacag
1441 acacacacac acacacacac acacacattt tgggacaagt ggggagccca agaaagtaat
1501 tagtaagtga gtggtctttt ctgtaagcta atccacaacc tgttaccact tcctgaatca
1561 gttattattt cttcattttt ttttctacca gaggacagat taatagattt aacccttcac
1621 gacagttctt gttagaatca tgggatgtgt ggcccagagg taagaataga atttctttcc
1681 ctaaagaaca taccttttgt agatgaactc ttctcaactc tgttttgcta tgctataatt
1741 ccgaaacata caagacaaaa aaaatgaaga cactcaatct agaacaaact gagccaggta
1801 tgcaaatatc gctgaataga aacagatgga attagaaata tatcttctat ttttaggctt
1861 ctatttcctt tccacccact cttcacaggc tattctactt taaaggaagc ctttttattt
1921 tgctgcacac aatctagcag gaatcttttt tttttttttt aagagctgtg tcatccttat
1981 gtaggcaaga gatgtttgct tttgttaaaa gctttattga gatataatta acataaaata
2041 aactgaacat atttaaagtg tactatttga taagttttca caccttgtgg agaacatgca
2101 tactacaatt aagagagtga acatatccat catccctcaa agtgtcacaa tgctcctcct
2161 gatgactcct ccccagaaaa ccaccaatcg gctttcattt tgcattttgt agttttatgt
2221 gaatggaatc atatagtatg tctttttttt ttgtctggct tctttcactt tgcataatta
2281 ttttgagatt catatgtctc catcttgatg ctcgtatgaa ttcattcttt taaatgttga
2341 atattccctt gtatggatat accacaattc atttacccat ttacttgttg atgacatttg
2401 ggttgtttta gttttgggat attacaaata aagctgctgt gaacatttgt gcaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa
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