LOCUS BC022268 2214 bp mRNA linear HUM 24-FEB-2004
DEFINITION Homo sapiens acyl-Coenzyme A oxidase-like, mRNA (cDNA clone
IMAGE:4730078), partial cds.
ACCESSION BC022268
VERSION BC022268.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2214)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922839.
FEATURES Location/Qualifiers
source 1..2214
/db_xref="H-InvDB:HIT000090556"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4730078"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..2214
/gene="ACOXL"
/gene_synonym="FLJ11042"
/db_xref="GeneID:55289"
CDS <1..1003
/gene="ACOXL"
/gene_synonym="FLJ11042"
/codon_start=2
/product="ACOXL protein"
/protein_id="AAH22268.1"
/db_xref="GeneID:55289"
/translation="EAGERDAAGAGSGARGLLPAPLPGRRLLEPQERAARTPRRRPLF
RQRYDLSLDEMRALTVQRVKFAMDLPLLKRAGQDLAEKTKNFVSRSLVIGEVLSMADM
ATGVKCGIIYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQT
EATFDLSAQEFVIDTPCENAEKMYIGNAMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD
ENGSLYPGVTAIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHLPIR
NKSARFNAMLAALTPSRLAVAFQAMGAMKLGLTIAIRYSHRSRIISQNCCSAPAGLY"
misc_feature 434..778
/gene="ACOXL"
/gene_synonym="FLJ11042"
/note="Acyl-CoA_dh_M; Region: Acyl-CoA dehydrogenase,
middle domain. Central domain of Acyl-CoA dehydrogenase
has a beta-barrel fold"
/db_xref="CDD:pfam02770"
BASE COUNT 558 a 510 c 535 g 611 t
ORIGIN
1 agaggcaggt gagcgcgatg cagccggcgc cgggtctggg gctcggggac tcctccctgc
61 accgctacct ggacggcgac ttctggagcc tcaagaacga gctgcgcgga ctcctcggcg
121 gcgcccgctc ttccggcaaa ggtatgattt aagcttggat gaaatgagag ctttgacagt
181 tcagagagtg aagtttgcca tggacctgcc tctgttaaaa cgtgcaggtc aggatctggc
241 agagaaaaca aagaattttg tcagccgaag ccttgtcata ggagaagtcc tctccatggc
301 ggacatggcc acaggagtga agtgcggaat aatttattgg ctatttggtg gtgctatcag
361 gaatctcgga agccctgaac atgttactaa gtggtttcag ccactccagg agcagaaata
421 cactgggatg tttgcaatga ccgagagggg ccatgggagc aacgcgagag ggatccagac
481 cgaagccacc tttgacctct ctgcccagga gtttgtaatt gacacgccgt gtgaaaatgc
541 ggagaagatg tatattggaa atgccatgta cgggaattat gcagctgtct ttgcccagct
601 catcatagat ggaagatctc aagggcccca ctgtttcatc gttcctgtcc gggatgaaaa
661 cggaagcttg tacccaggag tcacagctat tgatatgatg tacaaggagg gtctgcatgg
721 tgtggacaat gggatattaa tatttgacaa ggttcggata cccagggaga acctgctgga
781 taagtttggt tccgtggctc cagatggaca gtaccatttg cctattagga acaagagtgc
841 aagattcaat gccatgctgg cagcactgac cccttcgaga ttagctgtgg ctttccaagc
901 tatgggtgcc atgaagcttg ggttgacgat agccattcgc tatagccaca ggtccagaat
961 catctcccag aactgctgtt cagctccagc tggtctttat tgagcccctc ttgtggacca
1021 ggctaatttc ctgaaaactg gtttttgcta acgtttctta cgcttgctcg tgaaatcagc
1081 cacttaactg ttctgggttt tcccgtggca gatccctata ggcttctcac tgcactatcc
1141 caaacttttt atctgagaat gttgtgtggc aagatgtctg cagagtgccg cttaggagat
1201 gctggcctgg cgtccacggg tctgctgtgt atgtctctcc aggcagatgg cctgtctctg
1261 cctggcaagg acgatctggg gtggaaaaac tctgatctga aagtgaaatc attgactccg
1321 ttaccatgtt ctgaattccc agatctccct gatatggaaa gtgaaaattg gcttctatta
1381 cacaatgcat caaaattctt ttgtatagga ccagaccact gatatcaagg gcagtgcact
1441 gactttcagt tcctctgcat cccttggtca tgttcccacc tttcaatggg aacagagaat
1501 aaaaattcca gctctagggc ccagcctagt ggccacctct cacggacagg cacccggctg
1561 ctcagtgtta tccaattact agaggccatt cctagcattt caacttgggg aattaattta
1621 ctattacttt atttttatct ttagagacag agtcttgctc tgtcacccag actagagtgt
1681 agtggcatga tcatagctca ctgcagcctt gaactcctga gctcaggcaa tcctcctgcc
1741 acagccacct gagtagctgg aactataggc atgtgccatc atgcccaact aattttattt
1801 ttatttcagt tgtagagatg gagccttacc ctgttgccca ggctggtctc tgactcctgg
1861 tctctagtga tcctcctgcc ttggcctccc aaagtgctag gattataggt gtgagccaac
1921 atgctgtccc cattattgac tgttacccta aagtgtgtgt tgcctttcta gtttgagtag
1981 aaagtccagc attatctttt tggataatat ccaggttttg ctgtttcttt ctttattttt
2041 cataatgaga acatttgctc tcttgctgac attggagggc gtctgtttac ctctcctgta
2101 ggcacacaaa attcccaacg tttatttgaa gaaaaagaca attatttgag taatttgaat
2161 aaataaacat tttaagtgat tctcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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