LOCUS BC022256 1618 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens lipopolysaccharide binding protein, mRNA (cDNA clone
MGC:22233 IMAGE:4767724), complete cds.
ACCESSION BC022256
VERSION BC022256.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31652248.
FEATURES Location/Qualifiers
source 1..1618
/db_xref="H-InvDB:HIT000039433"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22233 IMAGE:4767724"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1618
/gene="LBP"
/gene_synonym="MGC22233"
/db_xref="GeneID:3929"
/db_xref="HGNC:HGNC:6517"
/db_xref="MIM:151990"
CDS 36..1469
/gene="LBP"
/gene_synonym="MGC22233"
/codon_start=1
/product="LBP protein"
/protein_id="AAH22256.1"
/db_xref="GeneID:3929"
/db_xref="HGNC:HGNC:6517"
/db_xref="MIM:151990"
/translation="MGALARALPSILLALLLTSTPEALGANPGLVARITDKGLQYAAQ
EGLLALQSELLRITLPDFTGDLRIPHVGRGRYEFHSLNIHSCELLHSALRPVPGQGLS
LSISDSSIRVQGRWKVRKSFFKLQGSFDVSVKGISISVNLLLGSESSGRPTVTASSCS
SDIADVEVDMSGDLGWLLNLFHNQIESKFQKVLESRICEMIQKSVSSDLQPYLQTLPV
TTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIFHRNHRSPVTLLAAVMSLPEEHNKM
VYFAISDYVFNTASLVYHEEGYLNFSITDDMIPPDSNIRLTTKSFRPFVPRLARLYPN
MNLELQGSVPSAPLLNFSPGNLSVDPYMEIDAFVLLPSSSKEPVFRLSVATNVSATLT
FNTSKITGFLKPGKVKVELKESKVGLFNAELLEALLNYYILNTFYPKFNDKLAEGFPL
PLLKRVQLYDLGLQIHKDFPSRRDHPP"
BASE COUNT 383 a 461 c 396 g 378 t
ORIGIN
1 gggacagtcc tggcccactg cactgggaat ctaggatggg ggccttggcc agagccctgc
61 cgtccatact gctggcattg ctgcttacgt ccaccccaga ggctctgggt gccaaccccg
121 gcttggtcgc caggatcacc gacaagggac tgcagtatgc ggcccaggag gggctattgg
181 ctctgcagag tgagctgctc aggatcacgc tgcctgactt caccggggac ttgaggatcc
241 cccacgtcgg ccgtgggcgc tatgagttcc acagcctgaa catccacagc tgtgagctgc
301 ttcactctgc gctgaggcct gtccctggcc agggcctgag tctcagcatc tccgactcct
361 ccatccgggt ccagggcagg tggaaggtgc gcaagtcatt cttcaaacta cagggctcct
421 ttgatgtcag tgtcaagggc atcagcattt cggtcaacct cctgttgggc agcgagtcct
481 ccgggaggcc cacagttact gcctccagct gcagcagtga catcgctgac gtggaggtgg
541 acatgtcggg agacttgggg tggctgttga acctcttcca caaccagatt gagtccaagt
601 tccagaaagt actggagagc aggatttgcg aaatgatcca gaaatcggtg tcctccgatc
661 tacagcctta tctccaaact ctgccagtta caacagagat tgacagtttc gccgacattg
721 attatagctt agtggaagcc cctcgggcaa cagcccagat gctggaggtg atgtttaagg
781 gtgaaatctt tcatcgtaac caccgttctc cagttaccct ccttgctgca gtcatgagcc
841 ttcctgagga acacaacaaa atggtctact ttgccatctc ggattatgtc ttcaacacgg
901 ccagcctggt ttatcatgag gaaggatatc tgaacttctc catcacagat gacatgatac
961 cgcctgactc taatatccga ctgaccacca agtccttccg acccttcgtc ccacggttag
1021 ccaggctcta ccccaacatg aacctggaac tccagggatc agtgccctct gctccgctcc
1081 tgaacttcag ccctgggaat ctgtctgtgg acccctatat ggagatagat gcctttgtgc
1141 tcctgcccag ctccagcaag gagcctgtct tccggctcag tgtggccact aatgtgtccg
1201 ccaccttgac cttcaatacc agcaagatca ctgggttcct gaagccagga aaggtaaaag
1261 tggaactgaa agaatccaaa gttggactat tcaatgcaga gctgttggaa gcgctcctca
1321 actattacat ccttaacacc ttctacccca agttcaatga taagttggcc gaaggcttcc
1381 cccttcctct gctgaagcgt gttcagctct acgaccttgg gctgcagatc cataaggact
1441 tcccctccag gagggaccac cctccctgac tggcctggga tatctttaca agcaggcact
1501 gtattttttt attcgccatc tgatccccat gcctagcaga gtgctggcac ttagtaggtc
1561 ctcaataaat atttattaaa tgatgaggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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