LOCUS BC022254 2289 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens DNA cross-link repair 1C (PSO2 homolog, S.
cerevisiae), mRNA (cDNA clone MGC:22216 IMAGE:4272155), complete
cds.
ACCESSION BC022254
VERSION BC022254.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2289)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2289)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11968040.
FEATURES Location/Qualifiers
source 1..2289
/db_xref="H-InvDB:HIT000039431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22216 IMAGE:4272155"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2289
/gene="DCLRE1C"
/gene_synonym="ARTEMIS"
/gene_synonym="DCLREC1C"
/gene_synonym="FLJ11360"
/gene_synonym="RS-SCID"
/gene_synonym="SCIDA"
/gene_synonym="SNM1C"
/db_xref="GeneID:64421"
/db_xref="MIM:605988"
CDS 23..1327
/gene="DCLRE1C"
/gene_synonym="ARTEMIS"
/gene_synonym="DCLREC1C"
/gene_synonym="FLJ11360"
/gene_synonym="RS-SCID"
/gene_synonym="SCIDA"
/gene_synonym="SNM1C"
/codon_start=1
/product="DCLRE1C protein"
/protein_id="AAH22254.1"
/db_xref="GeneID:64421"
/db_xref="MIM:605988"
/translation="MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRA
PTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWKKRIISIEIETPTQISLVDEASGE
KEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAQGEAARMELLHSGGRVKDIQ
SVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN
LSEELGVQVHVNKLDMFRNMPEILRHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITS
RNRIPLHIISIKPSTMWFGERSRKTNVIVRTGESSYRACFSFHSSYSEIKDFLSYLCP
VNAYPNVIPVGTTMDKVVEILKPLCRSSQSTEPKYKPLGKLKRARTVHRDSGSHSVTQ
ARMRWCHHDSLYPLTPGIKRSSCLSLLTSWITGAYRHAQLMI"
misc_feature 104..628
/gene="DCLRE1C"
/gene_synonym="ARTEMIS"
/gene_synonym="DCLREC1C"
/gene_synonym="FLJ11360"
/gene_synonym="RS-SCID"
/gene_synonym="SCIDA"
/gene_synonym="SNM1C"
/note="YSH1; Region: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing
[Translation, ribosomal structure and biogenesis]"
/db_xref="CDD:COG1236"
BASE COUNT 699 a 465 c 481 g 644 t
ORIGIN
1 ggactctggg atcggcggcg ctatgagttc tttcgagggg cagatggccg agtatccaac
61 tatctccata gaccgcttcg atagggagaa cctgagggcc cgcgcctact tcctgtccca
121 ctgccacaaa gatcacatga aaggattaag agcccctacc ttgaaaagaa ggttggagtg
181 cagcttgaag gtttatctat actgttcacc tgtgactaag gagttgttgt taacgagccc
241 gaaatacaga ttttggaaga aacgaattat atctattgaa atcgagactc ctacccagat
301 atctttagtg gatgaagcat caggagagaa ggaagagatt gttgtgactc tcttaccagc
361 tggtcactgt ccgggatcag ttatgttttt atttcagggc aataatggaa ctgtcctgta
421 cacaggagac ttcagattgg cgcaaggaga agctgctaga atggagcttc tgcactccgg
481 gggcagagtc aaagacatcc aaagtgtata tttggatact acgttctgtg atccaagatt
541 ttaccaaatt ccaagtcggg aggagtgttt aagtggagtc ttagagctgg tccgaagctg
601 gatcactcgg agcccgtacc atgttgtgtg gctgaactgc aaagcggctt atggctatga
661 atatttgttc accaacctta gtgaagaatt aggagtccag gttcatgtga ataagctaga
721 catgtttagg aacatgcctg agatccttcg tcatctcaca acagaccgca acactcagat
781 ccatgcatgc cggcatccca aggcagagga atattttcag tggagcaaat taccctgtgg
841 aattacttcc agaaatagaa ttccactcca cataatcagc attaagccat ccaccatgtg
901 gtttggagaa aggagcagaa aaacaaatgt aattgtgagg actggagaga gttcatacag
961 agcttgtttt tcttttcact cctcctacag tgagattaaa gatttcttga gctacctctg
1021 tcctgtgaac gcatatccaa atgtcattcc agttggcaca actatggata aagttgtcga
1081 aatcttaaag cctttatgcc ggtcttccca aagtacggag ccaaagtata aaccactggg
1141 aaaactgaag agagctagaa cagttcaccg agactcaggg tctcactctg tcactcaggc
1201 tagaatgcgg tggtgccatc atgactccct gtatccttta actcctggga tcaagcgatc
1261 ttcctgcctc agcctcctga ctagctggat cacaggtgca taccgccatg cccagctaat
1321 gatttagttt ttatagagat gtggggtctc actatgttgc ccacactggt ctggaactcc
1381 tgggctcaag tgagcctcca gccttgacct ccccaagtgc tgggattaac tgtacctggt
1441 tgatttatga ctttttaaac aggatttgag cagtacattg gaacactgca ttactttcat
1501 tataattagg atgttcaaaa agctatacaa ctatagctct ctacaggaca caactgaatg
1561 ttaaggacta aatctgcaag tatatgctct aaatatgatc caggcacatt tttcctataa
1621 cttatatata tgcagttaca aatggaaaat tgttaaaaat acaggggaga agctatgtta
1681 actttggaat ggaaggtttt gtttttgtag aatatgttat tttcatgcaa ttctgtaagt
1741 ctaagatcgt catctacagt tctgctctta agaacacaag ttttatgaca cgctcggctt
1801 aagaaaccaa aagtgtctaa agtactttat gttaccaacc aaatttggct gctgcactca
1861 ttaagaatgc aacttaaaaa attttggtta acaaaaagag taatttgatt atacaagatc
1921 ttgtatactg aataatttat aataatctac cactgtctaa aagtgtaaga atcaaaacag
1981 ccatctaatt tagtttcaga attatagatg aatacagata attataggtg acccaattcc
2041 aactaaaaaa tccagagttg acaactccag atatgtagcc atgcttgtgt ctttctagtc
2101 acagctcaac ctacccttca gtttgaagca gtgtggtgcc atggtgaaga ctactgattt
2161 tagagctttg aatctcggtt cttattacta tgtgacctgt gtgaccttgg gcaaggtact
2221 caatttctct acaataatgg acataacagt actacttctc aaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaa
//