LOCUS BC022094 1669 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens ubiquitin specific peptidase 30, mRNA (cDNA clone
IMAGE:3536512), partial cds.
ACCESSION BC022094
VERSION BC022094.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1669)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1669)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC022094.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: i Column: 10.
FEATURES Location/Qualifiers
source 1..1669
/db_xref="H-InvDB:HIT000090524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3536512"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1669
/gene="USP30"
/gene_synonym="FLJ40511"
/gene_synonym="MGC10702"
/db_xref="GeneID:84749"
CDS <1..1205
/gene="USP30"
/gene_synonym="FLJ40511"
/gene_synonym="MGC10702"
/codon_start=3
/product="USP30 protein"
/protein_id="AAH22094.2"
/db_xref="GeneID:84749"
/translation="LTLLHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQD
AHELFHVITSSLEDERDRQPRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWK
SQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSE
SVRDVVCDNCTKIEAKGTLNGEKVEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGT
PLKRHEHVQFNEFLMMDIYKYHLLGHKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQ
PGAPKTQIFMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVVHHGDMHSG
HFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVLSRMQHQ
SQECKSEE"
BASE COUNT 443 a 448 c 366 g 412 t
ORIGIN
1 ccttaacact cttgcacctt ctgaaagcct tgtcctgcca agaagttact gatgatgagg
61 tcttagatgc aagctgcttg ttggatgtct taagaatgta cagatggcag atctcatcat
121 ttgaagaaca ggatgctcac gaattattcc atgtcattac ctcgtcattg gaagatgagc
181 gagaccgcca gcctcgggtc acacatttgt ttgatgtgca ttccctggag cagcagtcag
241 aaataactcc caaacaaatt acctgccgca caagagggtc acctcacccc acatccaatc
301 actggaagtc tcaacatcct tttcatggaa gactcactag taatatggtc tgcaaacact
361 gtgaacacca gagtcctgtt cgatttgata cctttgatag cctttcacta agtattccag
421 ccgccacatg gggtcaccca ttgaccctgg accactgcct tcaccacttc atctcatcag
481 aatcagtgcg ggatgttgtg tgtgacaact gtacaaagat tgaagccaag ggaacgttga
541 acggggaaaa ggtggaacac cagaggacca cttttgttaa acagttaaaa ctagggaagc
601 tccctcagtg tctctgcatc cacctacagc ggctgagctg gtccagccac ggcacgcctc
661 tgaagcggca tgagcacgtg cagttcaatg agttcctgat gatggacatt tacaagtacc
721 acctccttgg acataaacct agtcaacaca accctaaact gaacaagaac ccagggccta
781 cactggagct gcaggatggg ccgggagccc ccacaccagt tctgaatcag ccaggggccc
841 ccaaaacaca gatttttatg aatggcgcct gctccccatc tttattgcca acgctgtcag
901 cgccgatgcc cttccctctc ccagttgttc ccgactacag ctcctccaca tacctcttcc
961 ggctgatggc agttgtcgtc caccatggag acatgcactc tggacacttt gtcacttacc
1021 gacggtcccc accttctgcc aggaaccctc tctcaactag caatcagtgg ctgtgggtct
1081 ccgatgacac tgtccgcaag gccagcctgc aggaggtcct gtcctccagc gcctacctgc
1141 tgttctacga gcgcgtcctt tccaggatgc agcaccagag ccaggagtgc aagtctgaag
1201 aatgactgtg ccctcctgca aggctagagc tgatggcact gtctgcactg tccaggaaaa
1261 aagtaaaact gtactgttgc gtgtgcaagc ggccccacta gagccttcca gccttctggt
1321 gtgttctaag agcaggctcc acctgggagc cagccccagt tcacaccaaa ccaggctccc
1381 tgaacagtcc tgttcatgtg tgtaggtggt tctgttgtgt taagaaagca ttcattatgt
1441 ccggagtgtc tttttactca tctgatacag gtaattaaaa gaactcagat tcttgaagcc
1501 accgttttca tattgtaatg ttaggtgttc tcagagggga ggtacctttg tctaatcaac
1561 gtttccactt agatctttta tttttaataa gcaggcccat aaaaattgtt gacaagaatt
1621 aatgaaatta ttaaaggcaa caatttagaa gaaaaaaaaa aaaaaaaaa
//