LOCUS BC022021 1696 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase-like 5, mRNA (cDNA clone
MGC:26636 IMAGE:4825619), complete cds.
ACCESSION BC022021
VERSION BC022021.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1696)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1696)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC022021.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222191.
FEATURES Location/Qualifiers
source 1..1696
/db_xref="H-InvDB:HIT000039356"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26636 IMAGE:4825619"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1696
/gene="GALNTL5"
/db_xref="GeneID:168391"
/db_xref="HGNC:HGNC:21725"
CDS 224..1555
/gene="GALNTL5"
/codon_start=1
/product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase-like 5"
/protein_id="AAH22021.1"
/db_xref="GeneID:168391"
/db_xref="HGNC:HGNC:21725"
/translation="MRNAIIQGLFYGSLTFGIWTALLFIYLHHNHVSSWQKKSQEPLS
AWSPGKKVHQQIIYGSEQIPKPHVIVKRTDEDKAKSMLGTDFNHTNPELHKELLKYGF
NVIISRSLGIEREVPDTRSKMRLQKHYPARLPTASIVICFYNEECNALFQTMSSVTNL
TPHYFLEEIILVDDMSKVDDLKEKLDYHLETFRGKVKIIRNKKREGLIRARLIGASHA
SGDVLVFLDSHCEVNRVWLEPLLHAIAKDPKMVVCPLIDVIDDRTLEYKPSPLVRGTF
DWNLQFKWDNVFSYEMDGPEGSTKPIRSPAMSGGIFAIRRHYFNEIGQYDKDMDFWGR
ENLELSLRIWMCGGQLFIIPCSRVGHISKKQTGKPSTIISAMTHNYLRLVHVWLDEYK
EQFFLRKPGLKYVTYGNIRERVELRKRLGCKSFQWYLDNVFPELEASVNSL"
BASE COUNT 551 a 325 c 368 g 452 t
ORIGIN
1 actgtgtggc cccgcaaccc agcacaacca ggtatctgct tggaacccag ccaccataaa
61 gcctgctagc taaaaaaaat tttacatctc tcagttcatt cggcacagac ccctgcctca
121 ttcagctgtg actctgcttg gaaaattcat cagttacaaa gcagccaatg caattatctc
181 aagggaaatt gaaaaatgga cctttgaaaa tgctagattt acaatgagaa atgccataat
241 tcaaggttta ttctatgggt ccttgacatt tgggatctgg acagctctgt tattcatata
301 tttgcaccat aatcatgtga gcagctggca gaagaaaagc caggagcctc tgtcagcttg
361 gtcccctgga aaaaaagtgc atcagcaaat tatctatggc tcagagcaaa taccaaaacc
421 tcatgtaata gtcaaaagga ctgatgaaga taaagcaaag tctatgttag gtacagattt
481 taaccataca aacccagaac ttcataaaga acttttaaaa tatggattta atgtgattat
541 cagtagaagc ttgggcatcg aaagagaagt gccagatacc aggagtaaaa tgcgtcttca
601 aaaacattac ccagcccgcc tcccgactgc cagcattgtc atttgcttct ataatgaaga
661 atgtaatgcc ttgtttcaga ccatgtccag tgtcacgaac ctcacgccac actattttct
721 tgaagaaatt attttggtag atgacatgag caaagttgat gatttgaaag aaaaactaga
781 ctatcacctg gaaacttttc ggggaaaggt taaaataata agaaacaaaa agagagaggg
841 gctgattcga gcaaggctga ttggagcttc tcatgcttca ggggatgttc tggtgttcct
901 ggacagccac tgtgaggtga acagagtatg gctggagccc ctgctgcatg ccattgccaa
961 ggaccccaaa atggtggtgt gccccctgat agatgtcatt gatgatagaa ctctggagta
1021 taagccctct cctcttgtaa ggggaacttt tgattggaac ctacaattta aatgggataa
1081 tgttttctct tatgagatgg atggaccaga aggatctact aaaccaatcc ggtcacctgc
1141 aatgtctgga ggaatttttg ctatacgtcg gcattatttt aatgaaattg gacagtatga
1201 caaggatatg gatttttggg gaagagaaaa tttggaactt tcactaagga tctggatgtg
1261 tggaggccaa ctctttataa tcccctgctc tcgagtagga catatcagta agaaacaaac
1321 tggaaaacct tctacaatca tcagtgctat gacacataac tacctaagac tggtgcacgt
1381 ttggctggat gaatataagg agcagttttt tcttcgaaag cctggtctga aatatgtcac
1441 ctacggaaat attcgcgagc gtgttgagtt aaggaaacga ctgggttgca agtcatttca
1501 gtggtatttg gataatgtct tcccagagtt ggaggcatct gtgaacagcc tgtgaaagga
1561 aaacaaatca ctttcattaa taaagggtta aaagtctcct agtcattcaa catagtgtca
1621 caagagtgta agtttggaac atcgtggaat tacgtgaaat gcaattaaaa aaatatgacc
1681 aaaaaaaaaa aaaaaa
//