LOCUS BC022016 2320 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens protein kinase C, iota, mRNA (cDNA clone MGC:26534
IMAGE:4823853), complete cds.
ACCESSION BC022016
VERSION BC022016.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2320)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2320)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC022016.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: g Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48255884.
FEATURES Location/Qualifiers
source 1..2320
/db_xref="H-InvDB:HIT000039352"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26534 IMAGE:4823853"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2320
/gene="PRKCI"
/gene_synonym="nPKC-iota"
/gene_synonym="PKCI"
/db_xref="GeneID:5584"
/db_xref="HGNC:HGNC:9404"
/db_xref="MIM:600539"
CDS 261..2024
/gene="PRKCI"
/gene_synonym="nPKC-iota"
/gene_synonym="PKCI"
/codon_start=1
/product="protein kinase C, iota"
/protein_id="AAH22016.3"
/db_xref="GeneID:5584"
/db_xref="HGNC:HGNC:9404"
/db_xref="MIM:600539"
/translation="MSHTVAGGGSGDHSHQVRVKAYYRGDIMITHFEPSISFEGLCNE
VRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPCVPE
RPGMPCPGEDKSIYRRGARRWRKLYCANGHTFQAKRFNRRAHCAICTDRIWGLGRQGY
KCINCKLLVHKKCHKLVTIECGRHSLPQEPVMPMDQSSMHSDHAQTVIPYNPSSHESL
DQVGEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV
KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH
MQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK
EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS
DNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQ
GHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNERVQLTPDDDDIVRKID
QSEFEGFEYINPLLMSAEECV"
BASE COUNT 651 a 478 c 566 g 625 t
ORIGIN
1 ttttgggccc gggcggctgt agaggcggcg gcgcctacgg gcagtgggag gagccgcgcg
61 gttccggctg ctccggcgag gcgacccttg ggtcggcgct gcgggcgagg tgggcaggta
121 ggtgggcgga cggccgcggt tctccggcaa gcgcaggcgg cggagtcccc cacggcgccc
181 gaagcgcccc cccgcacccc cggcctccag cgttgaggcg ggggagtgag gagatgccga
241 cccagaggga cagcagcacc atgtcccaca cggtcgcagg cggcggcagc ggggaccatt
301 cccaccaggt ccgggtgaaa gcctactacc gcggggatat catgataaca cattttgaac
361 cttccatctc ctttgagggc ctttgcaatg aggttcgaga catgtgttct tttgacaacg
421 aacagctctt caccatgaaa tggatagatg aggaaggaga cccgtgtaca gtatcatctc
481 agttggagtt agaagaagcc tttagacttt atgagctaaa caaggattct gaactcttga
541 ttcatgtgtt cccttgtgta ccagaacgtc ctgggatgcc ttgtccagga gaagataaat
601 ccatctaccg tagaggtgca cgccgctgga gaaagcttta ttgtgccaat ggccacactt
661 tccaagccaa gcgtttcaac aggcgtgctc actgtgccat ctgcacagac cgaatatggg
721 gacttggacg ccaaggatat aagtgcatca actgcaaact cttggttcat aagaagtgcc
781 ataaactcgt cacaattgaa tgtgggcggc attctttgcc acaggaacca gtgatgccca
841 tggatcagtc atccatgcat tctgaccatg cacagacagt aattccatat aatccttcaa
901 gtcatgagag tttggatcaa gttggtgaag aaaaagaggc aatgaacacc agggaaagtg
961 gcaaagcttc atccagtcta ggtcttcagg attttgattt gctccgggta ataggaagag
1021 gaagttatgc caaagtactg ttggttcgat taaaaaaaac agatcgtatt tatgcaatga
1081 aagttgtgaa aaaagagctt gttaatgatg atgaggatat tgattgggta cagacagaga
1141 agcatgtgtt tgagcaggca tccaatcatc ctttccttgt tgggctgcat tcttgctttc
1201 agacagaaag cagattgttc tttgttatag agtatgtaaa tggaggagac ctaatgtttc
1261 atatgcagcg acaaagaaaa cttcctgaag aacatgccag attttactct gcagaaatca
1321 gtctagcatt aaattatctt catgagcgag ggataattta tagagatttg aaactggaca
1381 atgtattact ggactctgaa ggccacatta aactcactga ctacggcatg tgtaaggaag
1441 gattacggcc aggagataca accagcactt tctgtggtac tcctaattac attgctcctg
1501 aaattttaag aggagaagat tatggtttca gtgttgactg gtgggctctt ggagtgctca
1561 tgtttgagat gatggcagga aggtctccat ttgatattgt tgggagctcc gataaccctg
1621 accagaacac agaggattat ctcttccaag ttattttgga aaaacaaatt cgcataccac
1681 gttctatgtc tgtaaaagct gcaagtgttc tgaagagttt tcttaataag gaccctaagg
1741 aacgattggg ttgtcttcct caaacaggat ttgctgatat tcagggacac ccgttcttcc
1801 gaaatgttga ttgggatatg atggagcaaa aacaggtggt acctcccttt aaaccaaata
1861 tttctgggga atttggtttg gacaactttg attctcagtt tactaatgaa cgtgtccagc
1921 tcactccaga tgacgatgac attgtgagga agattgatca gtctgaattt gaaggttttg
1981 agtatatcaa tcctcttttg atgtctgcag aagaatgtgt ctgatcctca tttttcaacc
2041 atgtattcta ctcatgttgc catttaatgc atggataaac ttgctgcaag cctggataca
2101 attaaccatt ttatatttgc cacctacaaa aaaacaccca atatcttctc ttgtagacta
2161 tatgaatcaa ttattacatc tgttttacta tgaaaaaaaa attaatacta ctagcttcca
2221 gacaatcatg tcaaaattta gttgaactgg tttttcagtt tttaaaaggc ctacagatga
2281 gtaatgaagt tatctttttt gtttaaaaaa aaaaaaaaaa
//