LOCUS BC021989 896 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3, mRNA
(cDNA clone MGC:24394 IMAGE:4066029), complete cds.
ACCESSION BC021989
VERSION BC021989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 896)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..896
/db_xref="H-InvDB:HIT000039333"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24394 IMAGE:4066029"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..896
/gene="BNIP3"
/gene_synonym="NIP3"
/db_xref="GeneID:664"
/db_xref="HGNC:HGNC:1084"
/db_xref="MIM:603293"
CDS 122..706
/gene="BNIP3"
/gene_synonym="NIP3"
/codon_start=1
/product="BCL2/adenovirus E1B 19kDa interacting protein 3"
/protein_id="AAH21989.1"
/db_xref="GeneID:664"
/db_xref="HGNC:HGNC:1084"
/db_xref="MIM:603293"
/translation="MSQNGAPGMQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDME
KILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIER
RKEVESILKKNSDWIWDWSSRPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAE
FLKVFLPSLLLSHLLAIGLGIYIGRRLTTSTSTF"
BASE COUNT 257 a 221 c 229 g 189 t
ORIGIN
1 ggggagtccg ggagcgcagc tgggccgcgg cgctccgacc tccgctttcc caccgcccgc
61 agctgaagca catcccgcag cccggcgcgg actccgatcg ccgcagttgc cctctggcgc
121 catgtcgcag aacggagcgc ccgggatgca ggaggagagc ctgcagggct cctgggtaga
181 actgcacttc agcaataatg ggaacggggg cagcgttcca gcctcggttt ctatttataa
241 tggagacatg gaaaaaatac tgctggacgc acagcatgag tctggacgga gtagctccaa
301 gagctctcac tgtgacagcc cacctcgctc gcagacacca caagatacca acagagcttc
361 tgaaacagat acccatagca ttggagagaa aaacagctca cagtctgagg aagatgatat
421 tgaaagaagg aaagaagttg aaagcatctt gaagaaaaac tcagattgga tatgggattg
481 gtcaagtcgg ccggaaaata ttccccccaa ggagttcctc tttaaacacc cgaagcgcac
541 ggccaccctc agcatgagga acacgagcgt catgaagaaa gggggcatat tctctgcaga
601 atttctgaaa gttttccttc catctctgct gctctctcat ttgctggcca tcggattggg
661 gatctatatt ggaaggcgtc tgacaacctc caccagcacc ttttgatgaa gaactggagt
721 ctgacttggt tcgttagtgg attacttctg agcttgcaac atagctcact gaagagctgt
781 tagatcctgg ggtggccacg tcacttgtgt ttatttgttc tgtaaatgct gcgttcctaa
841 tttagtaaaa taaaagaata gacaccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//