LOCUS BC021294 4105 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens calcium homeostasis endoplasmic reticulum protein,
mRNA (cDNA clone MGC:29449 IMAGE:4053575), complete cds.
ACCESSION BC021294
VERSION BC021294.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4105)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4105)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021294.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: b Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147634.
FEATURES Location/Qualifiers
source 1..4105
/db_xref="H-InvDB:HIT000039193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29449 IMAGE:4053575"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4105
/gene="CHERP"
/gene_synonym="DAN16"
/gene_synonym="SCAF6"
/gene_synonym="SRA1"
/db_xref="GeneID:10523"
/db_xref="HGNC:HGNC:16930"
CDS 156..2810
/gene="CHERP"
/gene_synonym="DAN16"
/gene_synonym="SCAF6"
/gene_synonym="SRA1"
/codon_start=1
/product="calcium homeostasis endoplasmic reticulum
protein"
/protein_id="AAH21294.1"
/db_xref="GeneID:10523"
/db_xref="HGNC:HGNC:16930"
/translation="MTMEKQKDNPKFSFLFGGEFYSYYKCKLALEQQQLICKQQTPEL
EPAATMPPLPQPPLAPAAPIPPAQGAPSMDELIQQSQWNLQQQEQHLLALRQEQVTAA
VAHAVEQQMQKLLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPPHCEL
MAGHLRNRITADGAHFELRLHLIYLINDVLHHCQRKQARELLAALQKVVVPIYCTSFL
AVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQATLINEYSSVVQPVQL
AFQQQIQTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAP
APAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPPNKPPWFDQ
PHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNN
QPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPH
PHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGI
NEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMA
PLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLY
EFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSC
SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS
APPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGV
ALDDPYENYRRNKSYSFIARMKARDECK"
BASE COUNT 916 a 1366 c 1116 g 707 t
ORIGIN
1 gcagacggcg ctggtggtcg atcgtgtggc gccggaggac gttccccgcg gccggagcca
61 tggagatgcc gctgcccccc gatgaccagg agcttcgaaa tgtcatcgac aagctcgccc
121 agttcgtggc tcgcaatggg cccgagtttg agaagatgac tatggagaag cagaaggaca
181 accccaaatt ctcgtttctt ttcggaggcg aattctacag ttactacaag tgcaagctgg
241 cgctggagca gcagcagctc atctgcaagc agcagacccc ggagctggag ccagccgcca
301 ccatgccacc cctgccacag cccccgctgg cccccgccgc gcccatcccg ccggcccagg
361 gcgcgccatc catggacgag ctcatccagc agagccagtg gaacctccag cagcaggagc
421 agcacttgct ggcgctcaga caggagcaag tgacagcggc cgtggcccac gcggtggagc
481 agcagatgca gaagcttctg gaggagaccc agctagacat gaacgagttt gacaacctcc
541 tgcagcccat catcgacacg tgcaccaagg acgccatctc ggccgggaag aactggatgt
601 tcagcaatgc caagtccccg ccgcactgtg agctgatggc cggccacctc cggaaccgca
661 tcacggctga tggggcacac ttcgagctgc ggctgcacct catctacctg atcaatgacg
721 tgctgcacca ctgccagcgc aagcaggccc gggagctgct ggccgccctg cagaaggtcg
781 tggtgcccat ctactgcacc agcttcttgg ccgtggagga agacaagcag cagaagatcg
841 cccggctcct gcagctctgg gagaaaaacg gctacttcga tgactccatc attcagcagc
901 tacagagccc agccctgggg cttggtcagt accaggccac cctcatcaac gagtactcct
961 cagtggtcca gccggtgcag ctggccttcc agcagcagat ccagaccctc aagacgcagc
1021 acgaggagtt tgtcaccagc ctggcccagc agcagcagca gcagcaacag cagcagcagc
1081 agctccagat gccgcagatg gaggctgaag tcaaggccac gcctccaccg cctgctccac
1141 ccccggcccc agcacctgcc cctgccatcc cgcccaccac ccagcctgat gacagcaagc
1201 ctcccatcca gatgcctggc tcttcagagt acgaagctcc aggaggggtc caggatcctg
1261 cagctgccgg cccccggggc cccgggccac acgaccagat cccaccaaac aagccccctt
1321 ggtttgacca gcctcacccc gtggctcctt ggggccagca gcagccgcca gagcagccac
1381 cctacccgca ccaccagggc ggcccacccc actgcccccc ctggaacaac agccatgagg
1441 gcatgtgggg cgagcagcgc ggtgaccccg gctggaacgg ccagcgcgac gcgccctgga
1501 acaaccagcc cgacgccgcc tggaacagcc agttcgaggg cccctggaac agccagcacg
1561 agcagccgcc ctggggcggg ggccagcgcg agccaccctt ccgcatgcag cggcccccac
1621 acttccgggg gcccttcccg ccccaccagc agcacccgca gttcaaccag cctccgcacc
1681 cccacaactt caaccgcttc ccgccccgct tcatgcagga cgacttcccg ccacggcacc
1741 ccttcgagcg gccgccctat ccccaccgct tcgactaccc ccagggggac ttccctgccg
1801 aaatggggcc ccctcaccac caccctggcc accgcatgcc tcatcctggc atcaacgagc
1861 acccgccttg ggctggaccc cagcaccctg acttcggccc tcccccccat ggcttcaacg
1921 ggcagccccc acacatgcgg cgacagggcc cgccccacat caaccacgat gaccccagcc
1981 tggtccccaa tgtgccctac ttcgatctcc ctgctgggct gatggccccc ctcgtgaagc
2041 tggaagatca cgagtacaag cctttggacc ctaaagacat ccgcctccca ccccccatgc
2101 cgcccagcga gaggctgctg gctgcagtgg aggccttcta cagccccccg tcccacgaca
2161 ggcccaggaa cagtgaaggc tgggagcaga acggcctcta tgagttcttc cgagcaaaaa
2221 tgcgggcccg gcggaggaaa ggccaggaga agaggaacag cggaccctcg aggtctcgga
2281 gcagatccaa gagtcgaggg cgttcttcct cccgctccaa ctcaagatcc tccaagtctt
2341 caggctcgta ctcaaggtca aggtcgcgct cctgctcccg ttcctactcc cgctccagat
2401 ctagaagtcg gagcaggtcg cgctcctcca gaagccgctc ccggtcccag tcgcggtccc
2461 ggtccaagtc gtactcccca ggaagaagac gccggtcacg gtccaggagc cccaccccgc
2521 cttcctctgc tggtctgggt tctaattcgg cgcctcccat tcctgactca aggctcggag
2581 aagagaacaa aggccatcag atgctggtga agatgggctg gagcggctca ggcggcctcg
2641 gtgcgaagga gcaagggatc caggacccca tcaagggcgg ggacgtccgg gataagtggg
2701 accagtataa aggcgtgggc gtggctctgg atgaccccta tgagaactac cgcaggaaca
2761 agagctactc cttcatcgcc cgcatgaagg ccagggacga gtgtaagtag gcgcccatgc
2821 cgggagccgc gccggtggcc agcggtgccg gctgtgggac cttcctggct gactggcaga
2881 ggaagattgc agtgacagct cagttcttac accgtctcca cttgtggaga gccacaggaa
2941 gagaaggaag accagcgcat gcccagtggg aacgccgtgc tccatggcgt ggagggcacg
3001 ggtgccaccc acaaaccaca ccaggaggcg ctgcagccac cagggcccca ggctcgtttt
3061 cctttatagc gaagcaaaaa acacaagacc ctccgcccga gtaaattctt cagccacgaa
3121 gggatggatg tgcatctgcc ctaagtcaga ttgaagcctc ctcctaggct ccaggaggag
3181 catgtgcagg aagggttggc ctgagccaga gccggcaccc cagctccttc ctccagctcc
3241 ccgcacccac cggccctgac ctggcttccc ctcggctgtg tagggacaaa gccgaagccc
3301 agtgccatga ctgcccgcgg attgaaaaac agaaacacaa aactttgact tgacttgcga
3361 agtgaagcag ggttttcatt tttactctcc ttggtttagg tctagaaaga agaatactga
3421 cctgagagga ggcccagtga gattctgaaa cctaattctt cgaaggcgta ctggccctta
3481 gttcagttat tttagttgta taagttgata ttttttttct ggaatgtagc catttgctgt
3541 tatctgggaa acaagattct aacaggaaac cagcctaaga cacttcaggt tgagcgctgc
3601 ctcggagtct gtgcccgtcg cgtcccctgc ttgagttttg cacttggaag aaccctgcac
3661 cggctggcgt gtgcgacggc ccagtcccat ccagagcatg gagcccgacc ccagccagcg
3721 ccttccactc catcatttca tttcacaccc ccgaagggag gggaggccag gaggggagct
3781 gctcctgcca gaagctggtg ggtgaccgtt gggaatcggc cacacctggt gtccatgggc
3841 agcctggtgc aattccattc atttgtacag aaacattttt gaaaaattct tttcaataag
3901 atgcaaaatc ttccaacttt tcaacccaac gtgatgaata tttgattttg ttctagattt
3961 cctgtagctg tgaattgtta aaatgtatga ttcaggataa aacgtaaaca cgtgctgtta
4021 gtaatttctt gtggatttca ttgttttgcc ttcaaataaa gccttttttt aaagaaaaaa
4081 aaaaaaaaaa aaaaaaaaaa aaaaa
//