LOCUS BC021200 1683 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain, phosphoinositide interacting 2, mRNA
(cDNA clone MGC:11392 IMAGE:3957981), complete cds.
ACCESSION BC021200
VERSION BC021200.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1683)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1683)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021200.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54111429.
FEATURES Location/Qualifiers
source 1..1683
/db_xref="H-InvDB:HIT000039137"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11392 IMAGE:3957981"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1683
/gene="WIPI2"
/gene_synonym="Atg21"
/gene_synonym="CGI-50"
/gene_synonym="DKFZP434J154"
/gene_synonym="FLJ12979"
/gene_synonym="FLJ14217"
/gene_synonym="FLJ42984"
/gene_synonym="WIPI-2"
/db_xref="GeneID:26100"
/db_xref="HGNC:HGNC:32225"
/db_xref="MIM:609225"
CDS 158..1522
/gene="WIPI2"
/gene_synonym="Atg21"
/gene_synonym="CGI-50"
/gene_synonym="DKFZP434J154"
/gene_synonym="FLJ12979"
/gene_synonym="FLJ14217"
/gene_synonym="FLJ42984"
/gene_synonym="WIPI-2"
/codon_start=1
/product="WD repeat domain, phosphoinositide interacting
2"
/protein_id="AAH21200.1"
/db_xref="GeneID:26100"
/db_xref="HGNC:HGNC:32225"
/db_xref="MIM:609225"
/translation="MNLASQSGEAGAGQLLFANFNQDNTEVKGASRAAGLGRRAVVWS
LAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVC
HFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAG
LCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLA
TASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFK
LETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNIC
SLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHD
CPLVTQTYGAAAGKGTYVPSSPTRLAYTDDLGAVGGACLEDEASALRLDEDSEHPPMI
LRTD"
BASE COUNT 414 a 468 c 479 g 322 t
ORIGIN
1 caagagcggg gacgggatga ggcggcggtt gatcccaggg tggcgagtgg cggcgaccga
61 ggcggcgagc ggggcccggc gccgaccctg agtgcagcct gacccgccct cgcgcgcgcg
121 ccctccccgg ccgggcccac tcgccgcgcg cccagccatg aacctggcga gccagagcgg
181 ggaggccggc gccggccagc tgctcttcgc caacttcaac caggacaaca cagaagtgaa
241 aggggcatca agagcagctg gtcttggccg tcgcgctgtt gtctggtccc tagctgttgg
301 tagtaagtcc ggttataaat ttttctccct ttcttctgtg gataagctgg aacagatcta
361 tgaatgcacc gatacggaag atgtgtgcat tgtagagaga ttgttctcca gcagcctagt
421 ggccatcgtg agccttaaag caccaaggaa gctaaaggtt tgccacttta agaagggaac
481 tgagatctgc aactacagct actccaacac gattctggct gtgaagctca acaggcagag
541 gctgatagta tgcctggagg agtccctgta catccacaac attcgggaca tgaaggtgct
601 gcatacgatc agggagacgc ctccaaaccc tgcaggcctg tgtgcgctgt caatcaacaa
661 cgacaactgc tacttggcgt acccagggag cgcgaccatc ggagaggtgc aggtcttcga
721 taccattaat ttgagagctg caaacatgat tccggctcac gacagtcctt tagcggcact
781 ggcctttgac gcaagtggaa ctaaacttgc cacggcttcg gagaagggga ccgtgattag
841 ggtattttcc attccagaag gacaaaaact ctttgagttt cggagaggag taaagaggtg
901 cgtgagcatc tgctccctgg ccttcagcat ggacggcatg ttcctctccg cctccagcaa
961 cactgagacc gtgcacatct tcaaactcga gactgtgaaa gaaaaacccc cagaggagcc
1021 caccacctgg accgggtact tcgggaaagt gctcatggcc tccaccagct acctgccttc
1081 ccaagtgaca gaaatgttca accagggcag agccttcgcc acggtccgcc tgccattctg
1141 cggccacaaa aacatctgct cgctagccac aattcagaag atcccgcggt tgttggtggg
1201 tgccgccgac gggtacctgt acatgtacaa cctggacccc caggagggcg gcgagtgtgc
1261 cctgatgaag cagcaccggc tggacggcag tctggaaacg accaatgaga tcttggactc
1321 tgcctctcac gactgcccct tagtcactca gacatacggc gcagctgcag gaaaaggtac
1381 ttacgtgcct tcatccccaa cgagacttgc ctacacagac gacctgggtg ctgtgggtgg
1441 cgcctgcctg gaggacgagg ccagcgccct gcgcctggat gaggacagcg agcacccgcc
1501 catgattctt cggactgact gaacttgacc tgtgacctct gacccgggga gcagagaaca
1561 ctggcttcac agaggacttt gtgcattgct gctatgaact ttgacctgag tcgggggaga
1621 ggatggcaga gactttatta aaaaaaaaaa aagattgtaa aaaaaaaaaa aaaaaaaaaa
1681 aaa
//