LOCUS BC021181 983 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 16 open reading frame 78, mRNA (cDNA clone
MGC:33367 IMAGE:5268227), complete cds.
ACCESSION BC021181
VERSION BC021181.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 983)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 983)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC021181.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059750.
FEATURES Location/Qualifiers
source 1..983
/db_xref="H-InvDB:HIT000039123"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33367 IMAGE:5268227"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..983
/gene="C16orf78"
/gene_synonym="MGC33367"
/db_xref="GeneID:123970"
/db_xref="HGNC:HGNC:28479"
CDS 44..841
/gene="C16orf78"
/gene_synonym="MGC33367"
/codon_start=1
/product="chromosome 16 open reading frame 78"
/protein_id="AAH21181.1"
/db_xref="GeneID:123970"
/db_xref="HGNC:HGNC:28479"
/translation="MSEQQMDLKDLMPTKRKYMWKTAEDRRMSDLTCVLEWLERRQGK
KKQAPEKQKPKVVTVLKRNKKKEEKKGKGLMTARGGNRRDTETSQQALGKRFRKDAAS
YRSLYGVEQKGKHLSMVPGSYIKDGPKKSDTDIKDAVDPESTQRPNPFRRQSIVLDPM
LQEGTFNSQRATFIRDWSNKMPDMAYERKLKSLMEKSTEPKMETMRMLKPEEVLSCRY
LRLSKENIRTLLKLCKDAGMNVDIHPHMVEEDIDAKKVFTGIPSMAL"
BASE COUNT 317 a 250 c 249 g 167 t
ORIGIN
1 agtgtcagcc acctcccacc caagccacta gcaagactcc acaatgtcag agcaacaaat
61 ggacctgaag gatttaatgc ccacaaagag gaaatacatg tggaagactg ctgaagatag
121 gcgcatgtct gacctcacct gtgtgctgga gtggctggag cggaggcagg ggaagaagaa
181 acaagctccc gagaagcaaa agcccaaagt ggtgacagtc cttaaacgaa ataagaagaa
241 ggaagagaag aaaggcaaag gcctcatgac agcacgggga gggaaccgca gggacacgga
301 gacttcccag caggccttag gaaagagatt caggaaggac gccgcctcct accgaagcct
361 ctatggagtg gagcaaaagg ggaaacacct cagcatggtc cctggcagct acatcaagga
421 tggccccaag aaatctgata cagacatcaa ggatgcagtc gacccagagt ccactcagcg
481 gccaaaccca ttccgtcgac aaagcattgt cttagatccc atgttacagg agggtacctt
541 taacagccag agggcaacct tcataagaga ctggtccaac aagatgcctg acatggctta
601 cgaacgcaag ctaaagagcc tcatggagaa aagcaccgaa cctaagatgg aaaccatgag
661 gatgttgaag ccagaggagg tgctgagctg ccgatacctg aggttatcca aggagaacat
721 tcggaccttg ctcaagttgt gcaaggatgc aggaatgaat gtggatatcc acccccacat
781 ggtcgaagag gacatagatg ctaaaaaggt gttcaccgga atacccagca tggccctcta
841 aatagctcct ctcgccacca ccttcaggct ccttctgtca tgggaccctt cacctccaga
901 tgccatcctc tggcacacta caagtggtcc ttccaactta gtgcatccct ttagaaagta
961 agcaatcaga aaaaaaaaaa aaa
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