LOCUS BC021179 785 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens gametocyte specific factor 1, mRNA (cDNA clone
MGC:33248 IMAGE:4823487), complete cds.
ACCESSION BC021179
VERSION BC021179.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 785)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 785)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: l Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389378.
FEATURES Location/Qualifiers
source 1..785
/db_xref="H-InvDB:HIT000039121"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33248 IMAGE:4823487"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..785
/gene="GTSF1"
/db_xref="GeneID:121355"
/db_xref="HGNC:HGNC:26565"
CDS 53..556
/gene="GTSF1"
/codon_start=1
/product="gametocyte specific factor 1"
/protein_id="AAH21179.1"
/db_xref="GeneID:121355"
/db_xref="HGNC:HGNC:26565"
/translation="MEETYTDSLDPEKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDV
ASKLATCPFNARHQVPRAEISHHISSCDDRSCIEQDVVNQTRSLRQETLAESTWQCPP
CDEDWDKDLWEQTSTPFAWGTTHYSDNNSPASNIVTEHKNNLASGMRVPKSLPYVLPW
KNNGNAQ"
BASE COUNT 240 a 201 c 147 g 197 t
ORIGIN
1 agcggagggg tgtgtccacc gagcacttgg attcagcttc ttcatttcca acatggaaga
61 aacttacacc gactccctgg accctgagaa gctattgcaa tgcccctatg acaaaaacca
121 tcaaatcagg gcttgcaggt ttccttatca tcttatcaag tgcagaaaga atcatcctga
181 tgttgcaagc aaattggcta cttgtccctt caatgctcgc caccaggttc ctcgagctga
241 aattagtcat catatctcaa gctgtgatga cagaagttgt attgagcaag atgttgtcaa
301 ccaaaccagg agccttagac aagagactct ggctgagagc acttggcagt gccctccttg
361 cgatgaagac tgggataaag atttgtggga gcagaccagc accccatttg cctggggcac
421 aactcactac tctgacaaca acagccctgc gagcaacata gttacagaac ataagaataa
481 cctggcttca ggcatgcgag ttcccaaatc tctgccgtat gttctgccat ggaaaaacaa
541 tggaaatgca cagtaactga atacctatct catcaaatgc cagaccctag aagactgttg
601 cttcttcttc taccagtggg ttctcatttt cctcctaatc taattataga atagtaaact
661 ccctgtgact ttccaaactg acaagcacac ttttttcctc cccccttgaa tcctcattta
721 atgcaagaac cctcatactc agaagcttcc aaataaacct ttgatacaga aaaaaaaaaa
781 aaaaa
//