LOCUS BC021133 2618 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens small ArfGAP2, mRNA (cDNA clone MGC:32048
IMAGE:4855320), complete cds.
ACCESSION BC021133
VERSION BC021133.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23943871.
FEATURES Location/Qualifiers
source 1..2618
/db_xref="H-InvDB:HIT000039104"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32048 IMAGE:4855320"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2618
/gene="SMAP2"
/gene_synonym="RP1-228H13.3"
/db_xref="GeneID:64744"
/db_xref="HGNC:HGNC:25082"
CDS 66..1355
/gene="SMAP2"
/gene_synonym="RP1-228H13.3"
/codon_start=1
/product="small ArfGAP2"
/protein_id="AAH21133.1"
/db_xref="GeneID:64744"
/db_xref="HGNC:HGNC:25082"
/translation="MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIG
VFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFR
RPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEK
VKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVP
SPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT
PQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMA
MPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQ
MAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK"
BASE COUNT 677 a 654 c 625 g 662 t
ORIGIN
1 ctgaggcagg ggtctctggg ggcgaggagg gcgcgtcgcc ctctgccccc gccggcaccc
61 tggccatgac aggcaagtcg gtgaaggacg tggatcggta ccaggctgtc ctggccaacc
121 tgctgctgga ggaggataac aagttttgtg cagattgcca gtctaaaggg ccgcgatggg
181 cctcttggaa cattggtgtg ttcatctgca ttcgatgtgc tggaatccac aggaatctgg
241 gggtgcacat atccagggta aagtcagtta acctcgacca gtggactcaa gaacagattc
301 agtgcatgca agagatggga aatggaaagg caaaccgact ttatgaagcc tatcttcctg
361 agacctttcg gcgacctcag atagacccag ctgttgaagg atttattcga gacaaatatg
421 agaagaagaa atacatggac cgaagtctgg acatcaatgc ctttaggaaa gaaaaagatg
481 acaagtggaa aagagggagc gaaccagttc cagaaaaaaa attggaacct gttgtttttg
541 agaaggtgaa aatgccacag aaaaaagaag acccacagct acctcggaaa agctccccga
601 aatccacagc gcctgtcatg gatttgttgg gccttgatgc tcctgtggcc tgctccattg
661 caaatagtaa gaccagcaat accctagaga aggatttaga tctgttggcc tctgttccat
721 ccccttcttc ttccggttcc agaaaggttg taggttccat gccaactgca gggagtgccg
781 gctctgttcc tgaaaatctg aacctgtttc cggagccagg gagcaaatca gaagaaatag
841 gcaagaaaca gctctctaaa gactccattc tttcactgta tggatcccag acgcctcaaa
901 tgcctactca agcaatgttc atggctcccg ctcagatggc atatcccaca gcctacccca
961 gcttccccgg ggttacacct cctaacagca taatggggag catgatgcct ccaccagtag
1021 gcatggttgc tcagccagga gcttctggga tggttgcccc catggccatg cctgcaggct
1081 atatgggtgg catgcaggca tcaatgatgg gtgtgccgaa tggaatgatg accacccagc
1141 aggctggcta catggcaggc atggcagcta tgccccagac tgtgtatggg gtccagccag
1201 ctcagcagct gcaatggaac cttactcaga tgacccagca gatggctggg atgaacttct
1261 atggagccaa tggcatgatg aactatggac agtcaatgag tggcggaaat ggacaggcag
1321 caaatcagac tctcagtcct cagatgtgga aataaaaaca aaacacctgt atggctgcca
1381 ttctcttcag ccctcgctct cccctttcca cagcctccac ccctgacccc catcctcttt
1441 tcctacctct ctgtttggtt tagaaattgc tcaataagtc atttggggtt tggcatcctg
1501 cccagccact tcccaaacat gaagacctct ctgttgcttt atgttgtaca tgccccatag
1561 ccatcccaac gtcctcccca gtcctctcct ggcaccagca ccttagaagt tgttggcaga
1621 aggcacttaa actgtgggag aagtgtgcac acctttgagt cccttccctc aaggttaaag
1681 ctcctgtcag actctcagaa gggtctgtgg gtgttgtata ttaggcaaac aggggaaagc
1741 ttagaggtcc ttctatatgt gttaataagc tgtttctaag tgtttaaatt tgaaaagcat
1801 catgttctca tgatttatgg gaatgaagca agtactgaaa tcaaattaaa tactccctgg
1861 gtcctgggtc agtttgaccc tagccctggg gtgaggcaag ccccctccta tgaggatgag
1921 caaaaatact actctcttcg ccctgagttg ctttctggat ctggggcttc aggacttgct
1981 gcttcagtca gcttttatta gcaccaaaga ctttatgaag atcccacaca cagacacaca
2041 tcccttcccg cctcccccct gccttcagta ggatctggct ccgtggctgg aggaccaacc
2101 cctatagtgg gaatgcagag cttaacgtgt actgcttgtg tgtgtgcgtg agtgtgtgtg
2161 tgtgtatgag tgtgtgttcc gcctcccacc ctctccccat ctgctctggg tatttttgtt
2221 tttgtttagt tttaggttta caacagagag gaattaattt atcagcagcc taaaactgtt
2281 gtgtttttct tatggtttaa aaaacgccat gtcattgata actccctttc tcccttccct
2341 tctcccggtc tgctgatcac tctttcatgc ctgtgtatcc agggtgctct gtttccccac
2401 cgttcccagg tgtacgaggc agagggccgg gacagctttc ctctcagtca ttgttcaccc
2461 cacttgaaaa ttcagacaag aaaactttgc ttaaaagatt tcatgtgtgg gaaccacagt
2521 tcctggctgc ctttctcctg tgtatgtgta aattccttaa taaatattgc agggaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//