LOCUS BC021095 2852 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 86, mRNA (cDNA clone
MGC:31800 IMAGE:4588378), complete cds.
ACCESSION BC021095
VERSION BC021095.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2852)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2852)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: f Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38201703.
FEATURES Location/Qualifiers
source 1..2852
/db_xref="H-InvDB:HIT000039082"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31800 IMAGE:4588378"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2852
/gene="C9orf86"
/gene_synonym="bA216L13.9"
/gene_synonym="FLJ10101"
/gene_synonym="FLJ13045"
/gene_synonym="pp8875"
/gene_synonym="RP11-216L13.9"
/db_xref="GeneID:55684"
/db_xref="HGNC:HGNC:24703"
CDS 109..2169
/gene="C9orf86"
/gene_synonym="bA216L13.9"
/gene_synonym="FLJ10101"
/gene_synonym="FLJ13045"
/gene_synonym="pp8875"
/gene_synonym="RP11-216L13.9"
/codon_start=1
/product="chromosome 9 open reading frame 86"
/protein_id="AAH21095.2"
/db_xref="GeneID:55684"
/db_xref="HGNC:HGNC:24703"
/translation="MKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSY
KTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDPQEAESEMALDAEFLDVYKNCNGVVM
MFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDMGEHRVILPDDVRDFIDNLDRPPG
SSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLLRQLETNQLDMDATLEELSVQQ
ETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQP
APQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPPPPEP
VPAAEGPATVQSVEDFVPDDRLDRSFLEDTTPARDEKKVGAKAAQQDSDSDGEALGGN
PMVAGFQDDVDLEDQPRGSPPLPAGPVPSQDITLSSEEEAEVAAPTKGPAPAPQQCSE
PETKWSSIPASKPRRGTAPTRTAAPPWPGGVSVRTGPEKRSSTRPPAEMEPGKGEQAS
SSESDPEGPIAAQMLSFVMDDPDFESEGSDTQRRADDFPVRDDPSDVTDEDEGPAEPP
PPPKLPLPAFRLKNDSDLFGLGLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEK
AAKKKSKHKKSKDKEEGKEERRRRQQRPPRSRERTAADELEAFLGGGAPGGRHPGGGD
YEEL"
BASE COUNT 610 a 884 c 928 g 430 t
ORIGIN
1 ctggtggggt cggaccaggc cccgggccgg gacaagaaca tccccgccgg gctgcagtcc
61 atgaaccagg cgttgcagag gcgcttcgcc aagggggtgc agtacaacat gaagatagtg
121 atccggggag acaggaacac gggcaagaca gcgctgtggc accgcctgca gggccggccg
181 ttcgtggagg agtacatccc cacacaggag atccaggtca ccagcatcca ctggagctac
241 aagaccacgg atgacatcgt gaaggttgaa gtctgggatg tagtagacaa aggaaaatgc
301 aaaaagcgag gcgacggctt aaagatggag aacgaccccc aggaggcgga gtctgaaatg
361 gccctggatg ctgagttcct ggacgtgtac aagaactgca acggggtggt catgatgttc
421 gacattacca agcagtggac cttcaattac attctccggg agcttccaaa agtgcccacc
481 cacgtgccag tgtgcgtgct ggggaactac cgggacatgg gcgagcaccg agtcatcctg
541 ccggacgacg tgcgtgactt catcgacaac ctggacagac ctccaggttc ctcctacttc
601 cgctatgctg agtcttccat gaagaacagc ttcggcctaa agtaccttca taagttcttc
661 aatatcccat ttttgcagct tcagagggag acgctgttgc ggcagctgga gacgaaccag
721 ctggacatgg acgccacgct ggaggagctg tcggtgcagc aggagacgga ggaccagaac
781 tacggcatct tcctggagat gatggaggct cgcagccgtg gccatgcgtc cccactggcg
841 gccaacgggc agagcccatc cccgggctcc cagtcaccag tggtgcctgc aggcgctgtg
901 tccacgggga gctccagccc cggcacaccc cagcccgccc cacagctgcc cctcaatgcc
961 gccccaccat cctctgtgcc ccctgtacca ccctcagagg ccctgccccc acctgcgtgc
1021 ccctcagccc ccgccccacg gcgcagcatc atctctaggc tgtttgggac gtcacctgcc
1081 accgaggcag cccctccacc tccagagcca gtcccggccg cagagggccc agcaacggtc
1141 cagagtgtgg aggactttgt tcctgacgac cgcctggacc gcagcttcct ggaagacaca
1201 acccccgcca gggacgagaa gaaggtgggg gccaaggctg cccagcagga cagcgacagt
1261 gatggggagg ccctgggcgg caacccgatg gtggcagggt tccaggacga tgtggacctc
1321 gaagaccagc cacgtgggag tcccccgctg cctgcaggcc ccgtccccag tcaagacatc
1381 actctttcga gtgaggagga agcagaagtg gcagctccca caaaaggccc tgccccagct
1441 ccccagcagt gctcagagcc agagaccaag tggtcctcca taccagcttc gaagccacgg
1501 agggggacag ctcccacgag gaccgcagca cccccctggc caggcggtgt ctctgttcgc
1561 acaggtccgg agaagcgcag cagcaccagg ccccctgctg agatggagcc ggggaagggt
1621 gagcaggcct cctcgtcgga gagtgacccc gagggaccca ttgctgcaca aatgctgtcc
1681 ttcgtcatgg atgaccccga ctttgagagc gagggatcag acacacagcg cagggcggat
1741 gactttcccg tgcgagatga cccctccgat gtgactgacg aggatgaggg ccctgccgag
1801 ccgcccccac cccccaagct ccctctcccc gccttcagac tgaagaatga ctcggacctc
1861 ttcgggctgg ggctggagga ggccggaccc aaggagagca gtgaggaagg taaggagggc
1921 aaaaccccct ctaaggagaa gaagaagaag aagaaaaaag gcaaagagga agaagaaaaa
1981 gctgccaaga agaagagcaa acacaagaag agcaaggaca aggaggaggg caaggaggag
2041 cggcgacggc ggcagcagcg gcccccgcgc agcagggaga ggacggctgc cgatgagctg
2101 gaggctttcc tggggggcgg ggccccgggc ggccgccacc ctgggggtgg cgactacgag
2161 gagctctagg ccggcgtggg cagtggccgc cctggggcgg ggggcgtgcc tgtcactgcc
2221 tggggaggca tttgcctctg taccatcgcc tttgccgctg ccccgtggct gccgtgtgcg
2281 cttctgagct ggaagaggcc gggcattggt ggtccccagg ctgggccctg caggtgctgg
2341 gccttcaggc ccagtgtgag cctgctctgc aagaagggag gggacagctg gcttcagcca
2401 ggctcggtgg acaccctggc cctctcgggg cagagccgcc agtgtttctc agggatgtga
2461 ctgaggccca ggagggacct gtgagggtct gtttacagag gctgggcagg ggccgcttgg
2521 ctgtggggtg tgcgctgccc cggcacctgc ttgccctccg cgctcatctg gggccgcagc
2581 atgcctatgg ttccgcttcc ggccgggagc cctgaacacg ggtgtgcaga ctcaccctaa
2641 agggcggccc aggccccacg ctagaaggct ggcgagaccg aaggcagcat gtgaggcctc
2701 tcctgggagt gggggttgtg tttcccacag tggcctcagc tgcgcccccg ctcaggtgag
2761 cccgaaggca ggagccggga ggcactcctc ccaaacactc cactcagacc ataaagcact
2821 cctgtttcac tctgaaaaaa aaaaaaaaaa aa
//