LOCUS BC020955 3687 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens TBC1 domain family, member 23, mRNA (cDNA clone
MGC:8800 IMAGE:3847561), complete cds.
ACCESSION BC020955
VERSION BC020955.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3687)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3687)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: i Column: 11.
FEATURES Location/Qualifiers
source 1..3687
/db_xref="H-InvDB:HIT000039043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8800 IMAGE:3847561"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3687
/gene="TBC1D23"
/gene_synonym="FLJ11046"
/gene_synonym="NS4ATP1"
/db_xref="GeneID:55773"
/db_xref="HGNC:HGNC:25622"
/db_xref="IMGT/GENE-DB:25622"
/db_xref="MIM:25622"
CDS 453..2096
/gene="TBC1D23"
/gene_synonym="FLJ11046"
/gene_synonym="NS4ATP1"
/codon_start=1
/product="TBC1D23 protein"
/protein_id="AAH20955.1"
/db_xref="GeneID:55773"
/db_xref="HGNC:HGNC:25622"
/db_xref="IMGT/GENE-DB:25622"
/db_xref="MIM:25622"
/translation="MNKYIPRDCSQKGRPFHLFRLLIQYHEPELCSYLDTKKITPDSY
ALNWLGSLFACYCSTEVTQAIWDGYLQQADPFFIYFLMLIILVNAKEVILTQESDSKE
EVIKFLENTPSSLNIEDIEDLFSLAQYYCSKTPASFRKDNHHLFGSTLLGIKDDDADL
SQALCLAISVSEILQANQLQGEGVRFFVVDCRPAEQYNAGHLSTAFHLDSDLMLQNPS
EFAQSVKSLLEAQKQSIESGSIAGGEHLCFMGSGREEEDMYMNMVLAHFLQKNKEYVS
IASGGFMALQQHLADINVDGPENGYGHWIASTSGSRSSINSVDGESPNGSSDRGMKSL
VNKMTVALKTKSVNVREKVISFIENTSTPVDRMSFNLPWPDRSCTERHVSSSDRVGKP
YRGVKPVFSIGDEEEYDTDEIDSSSMSDDDRKEVVNIQTWINKPDVKHHFPCKEVKES
GHMFPSHLLVTATHMYCLREIVSRKGLAYIQSRQALNSVVKITSKKKHPELITFKYGN
SSASGIEILAIERYLIPNAGDATKAIKQQIMKVLDALES"
BASE COUNT 1195 a 626 c 735 g 1131 t
ORIGIN
1 cggaaggaga agatgtgccg ccgctgccaa cgtcgagcgg cgacggctgg gaaaaagatc
61 ttgaagaagc tctggaagca ggaggttgtg atcttgaaac gttgagaaat ataattcaag
121 gaagaccgct gcctgctgat ctgagggcca aagtttggaa gattgctctg aatgttgcag
181 gaaaaggtga tagtttggca tcatgggatg gtattttaga cttgccagaa cagaacacta
241 ttcacaaaga ttgcctgcag tttattgacc agctttcagt gccagaggag aaggcagcag
301 aattactttt ggatattgaa tctgtaatta ccttttattg taaatcacgt aacattaaat
361 atagcacatc ccttagctgg atacatctac tgaaaccatt ggtgcatctt caactgccac
421 gcagcgattt atacaactgc ttttatgcca taatgaataa gtacattccc agggattgtt
481 cccagaaagg gagaccattt catctcttca ggttgctcat ccaataccat gagcctgagc
541 tttgttctta tcttgataca aagaaaatta ctccagactc ctatgcactc aactggcttg
601 gaagtctttt tgcatgttac tgttccactg aagtcactca ggcaatatgg gatggatatc
661 tacaacaagc agatccattt tttatttatt tcttaatgtt aattatcctt gttaatgcaa
721 aagaagttat tttaacacaa gagtcagaca gcaaagaaga agttatcaag ttcttggaaa
781 atactccatc cagtctgaat atagaagata tagaagacct tttctctctg gctcagtatt
841 attgcagcaa aacaccggct tcttttagga aggataatca ccatctcttt ggtagtactt
901 tgttgggaat taaggatgat gatgcagatc tgagtcaggc tctttgtctg gccatctccg
961 tgtcagagat ccttcaagcg aatcagctac aaggggaagg agtccggttc tttgtggtgg
1021 attgccgtcc tgcagaacaa tataatgctg ggcatttatc aactgctttc cacttagatt
1081 cagacctgat gcttcagaat ccatctgagt ttgcacagtc agtaaaatcc ttgctggaag
1141 cacagaagca gtccattgag tctggctcca tagctggtgg ggagcacctc tgttttatgg
1201 gcagtggcag ggaggaagaa gacatgtata tgaacatggt cctggcacac tttttacaga
1261 aaaacaaaga atatgtgagt attgccagtg gaggatttat ggcactgcag cagcacctgg
1321 cagacattaa tgtggatgga ccagaaaatg gatatggcca ttggattgct agtacctcag
1381 gctcaaggag cagtatcaat tctgttgatg gtgaatctcc taatggctca agtgatagag
1441 gaatgaaatc actagtaaat aaaatgactg tggctttgaa gacaaaatcc gttaatgtca
1501 gggaaaaagt tatcagtttt atagagaata catcaactcc tgtggatcga atgtctttca
1561 atcttccttg gccagacaga tcatgtacag agcggcatgt gagcagcagt gacagagtgg
1621 gcaagcctta ccgtggcgta aagcctgttt tcagcattgg ggatgaagaa gaatacgaca
1681 cagatgaaat tgacagttct tcaatgtcag atgatgatag aaaagaggtt gtaaacattc
1741 agacttggat aaacaaacca gatgtcaaac atcattttcc ttgtaaagaa gtaaaagaaa
1801 gtggacacat gtttcccagt catctgttgg ttactgcaac acatatgtac tgtttaaggg
1861 agattgtttc acggaaagga ttggcttata tacagtctcg acaagcgctg aattctgtag
1921 ttaaaattac atccaaaaaa aaacatcctg aactcattac cttcaagtat ggaaatagca
1981 gtgcttcagg aatagaaatc ttggcaatcg aaaggtattt gattccaaat gcaggggatg
2041 caactaaagc cataaaacag cagatcatga aagttttgga tgctttggaa agttaatata
2101 aaagaaaatt atataaaaag aaattaagac aaccaagaga aacatggaca tatacctcct
2161 gactgaatac taactggaga cctttcattt gctcatgggg ctgcttaaat agcaggtcta
2221 agaaagtgta aattattata atcaatctgt ggacagtaaa ctttttaaaa atttttcttc
2281 tgcattttgg ttttataaaa tgatgtatta taaaggtcag ttattaaatt actttgaagt
2341 aactgaccct gtgcccttat ggactaagta agggtacaga atgcagttct gttttgaaga
2401 gctgttttaa gggaacatgc atcactttcg ggatcaaaaa caactgtaca catacatatc
2461 tgcagtgtct tcactgaaaa ttagagatag aattagttga agagacttcc ttaattgcta
2521 cattgtttta ctcactgagc aatatcagaa actaaaacat agattaataa ttcactcact
2581 gtttctattc ttcttaaaaa gagtgaaatc tttttaatgg aatggttgaa gattcctgcc
2641 aactcaaaat acagtacagc tagtaaaatg ttgaaacatc agtttctaaa tcacctttgc
2701 tccattagct aattttttgg acactaaatg cttcaaagat aagaaacttc atcctaatga
2761 tttctaaaga gcagttaaaa gcattaaaat aagtaggtag gctgttaaga ttaaaattaa
2821 cattttgggg acagaattgt gtctgtaaaa atgtcattgg ttttattaca agcggattat
2881 tttattcata ttttaaaaca aatgtttaag ccacattgat ttatcctcat tgaggattat
2941 ggtctgtgac cacagtaata tccacttata taaatgccaa ataatcagag agcttataaa
3001 gtacaattgt ttttgtcatc attttctgaa tttctttctc ttcttttggt tttgtcctct
3061 cattgaagtt ccagtggttt gaaattagtt ttggacacat tgtcttaatg tactgaaaat
3121 tgctctgctg tattttgcag cgttcttcat ttaatttata atggtccata ttagacacat
3181 ttggtaagag aagtccagga acacatttag ggccatggaa tagtattttg taaaatccat
3241 ttgggaagtt gcaataccca caatctgaca tgtcctaaaa tgtaagggat tatctctaag
3301 gggttgatgg gagaaatatt tagatgtacc ctgttaacag ccagtcattt tgatttactt
3361 atggaaatca agtgaataaa aggcaacata atttgggaaa ttttattcta atatctaata
3421 aaaacagttt gagtggttga agacatctgc atgaaattgc acctaggtgc attacttgat
3481 ataactctcc cctaaaactg ttgtaattgc attttttccc ttttcttggc acccctttag
3541 aaatgtactg aagtctcatt tttcacccat ttcagccatg ggacattttt cataatatta
3601 atgtaaagat gtttgtgtta ctgtttataa attacaattg taaataaatt actagtttgc
3661 ccaaaaaaaa aaaaaaaaaa aaaaaaa
//