LOCUS BC020863 1670 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hydroxyacid oxidase 2 (long chain), mRNA (cDNA clone
MGC:24062 IMAGE:4557798), complete cds.
ACCESSION BC020863
VERSION BC020863.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1670)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1670)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54234004.
FEATURES Location/Qualifiers
source 1..1670
/db_xref="H-InvDB:HIT000039007"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24062 IMAGE:4557798"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1670
/gene="HAO2"
/gene_synonym="GIG16"
/gene_synonym="HAOX2"
/db_xref="GeneID:51179"
/db_xref="HGNC:HGNC:4810"
/db_xref="MIM:605176"
CDS 323..1378
/gene="HAO2"
/gene_synonym="GIG16"
/gene_synonym="HAOX2"
/codon_start=1
/product="hydroxyacid oxidase 2 (long chain)"
/protein_id="AAH20863.1"
/db_xref="GeneID:51179"
/db_xref="HGNC:HGNC:4810"
/db_xref="MIM:605176"
/translation="MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKR
IRLRPRYLRDVSEVDTRTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGIC
YITSTFASCSLEDIVIAAPEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTP
VCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLP
IILKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYL
DGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTG
CRSVAEINRNLVQFSRL"
BASE COUNT 467 a 387 c 409 g 407 t
ORIGIN
1 ggtgtgtttc ctaacacctc cggcagtgag ccaggctttg agtggctgcg tctaaacact
61 tctttccctg aggactggaa gacattagaa taagctccag acaattcaaa cattgagatt
121 cctgggaact accagatagt agcatcagtt caccaagaaa tgaagctggt gaggcagtga
181 aaatccaggg cctagaaagc tgggaatgcc atgacgtggg cacattgaaa gacaagaggc
241 aggcatgatc agccttgaac tttaggaaga tcccaggaag ctgatggaag acaagatgtg
301 gagtgaatgt gaaggtccag aaatgtcctt ggtgtgtctg acagactttc aggcccatgc
361 gcgagagcag ctgtctaagt caactcggga ttttattgaa ggtggagcag atgacagcat
421 cacgcgggat gacaacattg cagcatttaa aagaattcgc ctccgtccgc ggtacctgag
481 agatgtgtct gaggtggaca ccagaaccac aatccaaggg gaggagatca gtgcccctat
541 ttgtatcgca cccacagggt tccactgcct tgtctggcct gatggggaaa tgagcacagc
601 aagagctgcc caagcggctg gtatctgcta catcaccagc acatttgcca gctgtagcct
661 tgaagacatt gtcattgcag ctcccgaagg cctccgatgg ttccaactct atgtgcatcc
721 agacctgcag ctgaacaaac agttgatcca gagggtagaa tccctaggtt tcaaagcttt
781 ggtaataact ttggatacac ctgtatgtgg caacaggcga catgacattc gaaaccagtt
841 gaggaggaac ttaacactaa cagatcttca atcacctaaa aagggaaatg caatacctta
901 tttccagatg actcctatca gcacttctct ctgctggaat gatctctcct ggtttcagag
961 cataactcga ttgcccatca tcctgaaagg gattttgaca aaagaggatg cagagttagc
1021 tgtgaagcac aatgtccagg gtatcattgt ttccaaccat ggtgggaggc agcttgatga
1081 ggttcttgct tcaattgatg ctttgacaga agtggtggct gctgtaaagg ggaaaattga
1141 agtctacctg gatggcgggg tccgaactgg caatgatgtg ctgaaggctc tggcccttgg
1201 agctaagtgc atttttcttg ggagaccaat cctatggggc cttgcctgca agggtgaaca
1261 tggtgttaag gaagttttga acattttaac aaatgagttc cacacttcca tggcccttac
1321 aggctgccgg tcggtcgctg agatcaatcg aaacttggtc cagttttcca ggctgtaaga
1381 aaaaagggcc aataaccaga ctgctgaggt tgcccacagg aggatcacaa actcacagca
1441 cagtgtgtga tgctgtcctt cctggacccc attctgtccg gaggctcatg gcccatattt
1501 cccacatttc taataccacc acccctgtgc ttcaggccct ccaaacccct gtgttcccca
1561 aatgttccat gcccttcttt gtatcactga ctattatatg ttgctctctt gcctaaatct
1621 tcctctgaag taaaagatct taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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