LOCUS BC020734 914 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens prostaglandin D2 synthase, hematopoietic, mRNA (cDNA
clone MGC:22552 IMAGE:4731411), complete cds.
ACCESSION BC020734
VERSION BC020734.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 914)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: h Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657456.
FEATURES Location/Qualifiers
source 1..914
/db_xref="H-InvDB:HIT000038925"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22552 IMAGE:4731411"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..914
/gene="PGDS"
/db_xref="GeneID:27306"
/db_xref="MIM:602598"
CDS 69..668
/gene="PGDS"
/codon_start=1
/product="PGDS protein"
/protein_id="AAH20734.1"
/db_xref="GeneID:27306"
/db_xref="MIM:602598"
/translation="MPNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPEIKS
TLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDFMSCF
PWAEKKQDVKEQMFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTL
LVFKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL"
BASE COUNT 335 a 190 c 167 g 222 t
ORIGIN
1 ggcacagtca catacccagg gatacaagac actgcagact cccgagagac ataacacaga
61 attgcaccat gccaaactac aaactcactt attttaatat gagggggaga gcagaaatta
121 ttcgttacat atttgcttat ttggacatac agtatgaaga ccacagaata gaacaagctg
181 actggcctga aatcaaatca actctcccat ttggaaaaat ccccattttg gaagttgatg
241 gacttactct tcaccagagc ctagcaatag caagatattt gaccaaaaac acagatttgg
301 ctggaaacac agaaatggaa caatgtcatg ttgatgctat tgtggacact ctggatgatt
361 tcatgtcatg ttttccttgg gcagagaaaa agcaagatgt gaaagagcag atgttcaatg
421 agctgctcac gtataatgcg cctcatctta tgcaagactt ggacacatat ttagggggga
481 gagaatggct tattggtaac tctgtaactt gggcagactt ctactgggag atttgcagta
541 ccacactttt ggtctttaag cctgacctgt tagacaacca tccaaggctg gtgactttac
601 ggaagaaagt ccaagccatt cctgccgtcg ctaactggat aaaacgaagg ccccaaacca
661 aactctagct gatccatgtt gccttcaagt ttgtttttct cgggggcatc tctctcatca
721 gataagacag ctacatcagc ctgccagata atccacatgc tccctcccca gctccactaa
781 gattttcact ttagccatat tctgattttt aaaaaggaaa ataaaaacaa atctttcttc
841 agtaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaacaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaa
//