LOCUS BC020710 1373 bp mRNA linear HUM 16-DEC-2006
DEFINITION Homo sapiens hydroxysteroid (17-beta) dehydrogenase 6 homolog
(mouse), mRNA (cDNA clone MGC:22483 IMAGE:4700726), complete cds.
ACCESSION BC020710
VERSION BC020710.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1373)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1373)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19743807.
FEATURES Location/Qualifiers
source 1..1373
/db_xref="H-InvDB:HIT000038909"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22483 IMAGE:4700726"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1373
/gene="HSD17B6"
/gene_synonym="HSE"
/gene_synonym="RODH"
/db_xref="GeneID:8630"
/db_xref="HGNC:HGNC:23316"
/db_xref="MIM:606623"
CDS 111..1064
/gene="HSD17B6"
/gene_synonym="HSE"
/gene_synonym="RODH"
/codon_start=1
/product="hydroxysteroid (17-beta) dehydrogenase 6 homolog
(mouse)"
/protein_id="AAH20710.1"
/db_xref="GeneID:8630"
/db_xref="HGNC:HGNC:23316"
/db_xref="MIM:606623"
/translation="MWLYLAAFVGLYYLLHWYRERQVVSHLQDKYVFITGCDSGFGNL
LARQLDARGLRVLAACLTEKGAEQLRGQTSDRLETVTLDVTKMESIAAATQWVKEHVG
DRGLWGLVNNAGILTPITLCEWLNTEDSMNMLKVNLIGVIQVTLSMLPLVRRARGRIV
NVSSILGRVAFFVGGYCVSKYGVEAFSDILRREIQHFGVKISIVEPGYFRTGMTNMTQ
SLERMKQSWKEAPKHIKETYGQQYFDALYNIMKEGLLNCSTNLNLVTDCMEHALTSVH
PRTRYSAGWDAKFFFIPLSYLPTSLADYILTRSWPKPAQAV"
BASE COUNT 377 a 282 c 354 g 360 t
ORIGIN
1 agcagttggg gcaggaggaa gccgactgct gcctggtctg caaagaagtc ctttcaagtc
61 tctaggactg gactcttcct aagcaagtcc gagaaggaag caccctcact atgtggctct
121 acctggcggc cttcgtgggc ctgtactacc ttctgcactg gtaccgggag aggcaggtgg
181 tgagccacct ccaagacaag tatgtcttta tcacgggctg tgactcgggc tttgggaacc
241 tgctggccag acagctggat gcacgaggct tgagagtgct ggctgcgtgt ctgacggaga
301 agggggccga gcagctgagg ggccagacgt ctgacaggct ggagacggtg accctggatg
361 ttaccaagat ggagagcatc gctgcagcta ctcagtgggt gaaggagcat gtgggggaca
421 gaggactctg gggactggtg aacaatgcag gcattcttac accaattacc ttatgtgagt
481 ggctgaacac tgaggactct atgaatatgc tcaaagtgaa cctcattggt gtgatccagg
541 tgaccttgag catgcttcct ttggtgagga gagcacgggg aagaattgtc aatgtctcca
601 gcattctggg aagagttgct ttctttgtag gaggctactg tgtctccaag tatggagtgg
661 aagccttttc agatattctg aggcgtgaga ttcaacattt tggggtgaaa atcagcatag
721 ttgaacctgg ctacttcaga acgggaatga caaacatgac acagtcctta gagcgaatga
781 agcaaagttg gaaagaagcc cccaagcata ttaaggagac ctatggacag cagtattttg
841 atgcccttta caatatcatg aaggaagggc tgttgaattg tagcacaaac ctgaacctgg
901 tcactgactg catggaacat gctctgacat cggtgcatcc gcgaactcga tattcagctg
961 gctgggatgc taaatttttc ttcatccctc tatcttattt acctacatca ctggcagact
1021 acattttgac tagatcttgg cccaaaccag cccaggcagt ctaaagaaaa ctgggttggt
1081 gcttcttgga atgaaggcaa aaatctgaaa ttgttagtgt ctcagtaatc ctgatttaga
1141 acccaggctt tttgtaacaa tgtgttttct tgcctaaatt catttatctg gcatcatcag
1201 agtactaaca tgtttatatt tcagatatcc aaagcttacc actttaggtg atgaatcttt
1261 actattttag cccttttttg atgagactat ttgtctaaag tgaatcattt gttcttgcct
1321 tattaaacag agtagatgga aagcaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//