LOCUS BC020597 1322 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens general transcription factor IIB, mRNA (cDNA clone
MGC:22152 IMAGE:4807599), complete cds.
ACCESSION BC020597
VERSION BC020597.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1322)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1322)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52426766.
FEATURES Location/Qualifiers
source 1..1322
/db_xref="H-InvDB:HIT000038840"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22152 IMAGE:4807599"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1322
/gene="GTF2B"
/gene_synonym="TF2B"
/gene_synonym="TFIIB"
/db_xref="GeneID:2959"
/db_xref="HGNC:HGNC:4648"
/db_xref="MIM:189963"
CDS 66..1016
/gene="GTF2B"
/gene_synonym="TF2B"
/gene_synonym="TFIIB"
/codon_start=1
/product="general transcription factor IIB"
/protein_id="AAH20597.1"
/db_xref="GeneID:2959"
/db_xref="HGNC:HGNC:4648"
/db_xref="MIM:189963"
/translation="MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDR
VIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQ
NRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIA
SACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRF
CSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGD
IAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDKLPQL"
BASE COUNT 413 a 249 c 289 g 371 t
ORIGIN
1 acattcgctt cctgctttcg gtgtgtctgt tgtgtcttgt tgcgggcacc gcagtcgccg
61 tgaagatggc gtctaccagc cgtttggatg ctcttccaag agtcacatgt ccaaaccatc
121 cagatgcgat tttagtggag gactacagag ccggtgatat gatctgtcct gaatgtggct
181 tggttgtagg tgaccgggtt attgatgtgg gatctgaatg gcgaactttc agcaatgaca
241 aagcaacaaa agatccatct cgagttggag attctcagaa tcctcttctg agtgatggag
301 atttgtctac catgattggc aagggcacag gagctgcaag ttttgacgaa tttggcaatt
361 ctaagtacca gaatcggaga acaatgagca gttctgatcg ggcaatgatg aatgcattca
421 aagaaatcac taccatggca gacagaatca atctacctcg aaatatagtt gatcgaacaa
481 ataatttatt caagcaagta tatgaacaga agagcctgaa gggaagagct aatgatgcta
541 tagcttctgc ttgtctctat attgcctgta gacaagaagg ggttcctagg acatttaaag
601 aaatatgtgc cgtatcacga atttctaaga aagaaattgg tcggtgtttt aaacttattt
661 tgaaagcgct agaaaccagt gtggatttga ttacaactgg ggacttcatg tccaggttct
721 gttccaacct ttgtcttcct aaacaagtac agatggcagc tacacatata gcccgtaaag
781 ctgtggaatt ggacttggtt cctgggagga gccccatctc tgtggcagcg gcagctattt
841 acatggcctc acaggcatca gctgaaaaga ggacccaaaa agaaattgga gatattgctg
901 gtgttgctga tgttacaatc agacagtcct atagactgat ctatcctcga gccccagatc
961 tgtttcctac agacttcaaa tttgacaccc cagtggacaa actaccacag ctataaattg
1021 aggcagctaa cgtcaaattc ttgaatacaa aactttgcct gttgtacata gcctatacaa
1081 aatgctgggt tgagcctttc atgaggaaaa acaaaagaca tggtacgcat tccagggctg
1141 aatactattg cttggcattc tgtatgtata tactagtgaa acatatttaa tgatttaaat
1201 ttcttatcaa atttcttttg tagcaatcta ggaaactgta ttttggaaga tatttgaaat
1261 tatgtaattc ttgaataaaa catttttcaa aacacaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aa
//