LOCUS BC020580 3252 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cyclin-dependent kinase 5, regulatory subunit 1 (p35),
mRNA (cDNA clone MGC:21957 IMAGE:4392555), complete cds.
ACCESSION BC020580
VERSION BC020580.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3252)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3252)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC020580.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304373.
FEATURES Location/Qualifiers
source 1..3252
/db_xref="H-InvDB:HIT000038835"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21957 IMAGE:4392555"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3252
/gene="CDK5R1"
/gene_synonym="CDK5P35"
/gene_synonym="CDK5R"
/gene_synonym="MGC33831"
/gene_synonym="NCK5A"
/gene_synonym="p23"
/gene_synonym="p25"
/gene_synonym="p35"
/gene_synonym="p35nck5a"
/db_xref="GeneID:8851"
/db_xref="HGNC:HGNC:1775"
/db_xref="MIM:603460"
CDS 173..1096
/gene="CDK5R1"
/gene_synonym="CDK5P35"
/gene_synonym="CDK5R"
/gene_synonym="MGC33831"
/gene_synonym="NCK5A"
/gene_synonym="p23"
/gene_synonym="p25"
/gene_synonym="p35"
/gene_synonym="p35nck5a"
/codon_start=1
/product="cyclin-dependent kinase 5, regulatory subunit 1
(p35)"
/protein_id="AAH20580.1"
/db_xref="GeneID:8851"
/db_xref="HGNC:HGNC:1775"
/db_xref="MIM:603460"
/translation="MGTVLSLSPSYRKATLFEDGAATVGHYTAVQNSKNAKDKNLKRH
SIISVLPWKRIVAVSAKKKNSKKVQPNSSYQNNITHLNNENLKKSLSCANLSTFAQPP
PAQPPAPPASQLSGSQTGGSSSVKKAPHPAVTSAGTPKRVIVQASTSELLRCLGEFLC
RRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSEVGS
DHELQAVLLTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQIN
ADPHYFTQVFSDLKNESGQEDKKRLLLGLDR"
BASE COUNT 693 a 929 c 903 g 727 t
ORIGIN
1 tcgagcgcag gagctgccgc ctgccgggca gatccaaggg ggcagcacgc ttcccgggag
61 cgcccccgcc tcctctccgg ggccgccgca ggctcggtga gcggttttat ccctccggcc
121 ggcaggctgg gcgcgcaggg gcgcgagccc ccgcccggcg cgcagcagca ccatgggcac
181 ggtgctgtcc ctgtctccca gctaccggaa ggccacgctg tttgaggatg gcgcggccac
241 cgtgggccac tatacggccg tacagaacag caagaacgcc aaggacaaga acctgaagcg
301 ccactccatc atctccgtgc tgccttggaa gagaatcgtg gccgtgtcgg ccaagaagaa
361 gaactccaag aaggtgcagc ccaacagcag ctaccagaac aacatcacgc acctcaacaa
421 tgagaacctg aagaagtcgc tgtcgtgcgc caacctgtcc acattcgccc agcccccacc
481 ggcccagccg cctgcacccc cggccagcca gctctcgggt tcccagaccg ggggctcctc
541 ctcagtcaag aaagcccctc accctgccgt cacctccgca gggacgccca aacgggtcat
601 cgtccaggcg tccaccagtg agctgcttcg ctgcctgggt gagtttctct gccgccggtg
661 ctaccgcctg aagcacctgt cccccacgga ccccgtgctc tggctgcgca gcgtggaccg
721 ctcgctgctt ctgcagggct ggcaggacca gggcttcatc acgccggcca acgtggtctt
781 cctctacatg ctctgcaggg atgttatctc ctccgaggtg ggctcggatc acgagctcca
841 ggccgtcctg ctgacatgcc tgtacctctc ctactcctac atgggcaacg agatctccta
901 cccgctcaag cccttcctgg tggagagctg caaggaggcc ttttgggacc gttgcctctc
961 tgtcatcaac ctcatgagct caaagatgct gcagataaat gccgacccac actacttcac
1021 acaggtcttc tccgacctga agaacgagag cggccaggag gacaagaagc ggctcctcct
1081 aggcctggat cggtgagcac tgtagcctgc gtcatggctc aaggattcaa tgcattttta
1141 agaatttatt attaaatcag ttttgtgtac agtatgtgtc tagcaaagcc accaagggcc
1201 tcacctttcc cacagtctct ccctggggtt tttttcatcc ctgccaagaa ctctgggcac
1261 ttttgaactc acgagccttg cgcaaaaccc agaagatgta ttcagagcca cccaggccac
1321 tgacctccca ctttggggaa ctcaaaggac tgacctgccc ctgccgcctg tgcccttgct
1381 gggtccaggg taggcaaggc tgccggctgc accctgtatg gagctagaga ggggcctctg
1441 gctgcctggc ccagggagga attggggttt ctggttggag gcccttttct ggctcctgtg
1501 tggagttatt cactctccca gaggctcctg gagccagcca ccctaactga gctgccagtg
1561 gggtcgtgag gcaagatccc cgccacccgg ggacatcttc aatctaggcg aggcgaagct
1621 gagcgggtct agtggaaaga ttgtgtctgg tcgtttgacc acacaccgcc ctgatttgct
1681 gttttctttt tttagggaga agggcttttc tttagtggag aaatggaact cgccccccta
1741 cccccttgtc tgctgctccc agccacgttg gtggtattgg ccgatgagct ggtttgactc
1801 attaatttct ctcaatttgg gtcccagcta aagaggtggg gtgaagctgg ggacagcttt
1861 cctgggtgag tttttctttt gaataatgta gtgcagtcac cctgtggcaa atgccaggac
1921 agctgcaggt gcccattagc aacgcctgcc ttctgggcaa ggtgagggat gccatacctt
1981 gagaccaagc cggtgcccac ctaagggcta aggcctcttg ctggtgcaca tgacatttgt
2041 cctgcagagc tggggggaag gcgatgtggt gaccccaccc ccacccgtta atttaaagct
2101 gtttctaaac agttgagttt cttctaaaga ggaagccttg cccagcaagg accagtgaga
2161 cagccggatc ttggagacaa ttacaagacg gggagtgaga ctcctgattg ctctggaagc
2221 ctgctgattt ctacaactga tcatttgcag ctgctggttt tggtttccac cttaccctac
2281 tggctgtaaa aacacaaatg tgtactttat tgattttctt tctaattctc ccgcattggt
2341 ggcttgggac ttgggagagg gagcaagcct tcctccatgg cccatcactc ggctgtggag
2401 aacaaagacc aatgtgaaga cactacagag gattctgtct tccaggccca gtccactggg
2461 gagtgctgga atggggacct ggggtgggga ggcagagggt cactttacat aggattaagt
2521 tcgaggtggc taccgatttc agcacatgca ctactgaaat ttacacaaaa agaaagctgt
2581 gaaattgaag tcccaattta agagtcctga ggcagaacct ggtggctgga ggcattccca
2641 gaggtgggga agagagcctg cccggccgga gaacatctgc cttgctgcac ctgaggccca
2701 gcagagccgt tcctgggact gtcagataat cggtgcagcg gtggaaggag cctgcggctg
2761 ctggcacaga cttcacacag cacctcctct ctgctgggtt tccacacagc ctgtcttcag
2821 atcctgctgc cgcgtgcgac cagaggtggg aggcccctgg tggcatggaa gagggagggt
2881 cagtgccaag tctcaggagg agggcgcatg tgtgtatcac cctcagctgg cggaacctgg
2941 ctgcgaactg tgcagttacg ttgcatccac aggattccag ttgcgtgtct gtttccttct
3001 ctttctccgt atttattttt ttattcttcg gaggaggtgg acatttcgga agtggtgggg
3061 actaagggaa gaactctcta gttccctcag tgtgaagcct gtcgtgttct ctccccttgc
3121 actggtcatc agtattgtgt aaaggaacaa ctgatatact tgagtgtgca agcaaagaac
3181 ccatttgcca tgctgctatg aagactactt ttagatcaac aataaaaaaa aacctacaaa
3241 aaaaaaaaaa aa
//