LOCUS BC020224 2684 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens pim-1 oncogene, mRNA (cDNA clone MGC:31919
IMAGE:4591723), complete cds.
ACCESSION BC020224
VERSION BC020224.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2684)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2684)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543400.
FEATURES Location/Qualifiers
source 1..2684
/db_xref="H-InvDB:HIT000038763"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31919 IMAGE:4591723"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2684
/gene="PIM1"
/db_xref="GeneID:5292"
/db_xref="HGNC:HGNC:8986"
/db_xref="MIM:164960"
CDS 364..1305
/gene="PIM1"
/codon_start=1
/product="pim-1 oncogene"
/protein_id="AAH20224.1"
/db_xref="GeneID:5292"
/db_xref="HGNC:HGNC:8986"
/db_xref="MIM:164960"
/translation="MLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLL
GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG
VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN
CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY
HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS
DRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSK"
BASE COUNT 567 a 765 c 713 g 639 t
ORIGIN
1 cccgagagga gtcggtggca gcggcggcgg cgggaccggc agcagcagca gcagcagcag
61 cagcaaccac tagcctcctg ccccgcggcg ctgccgcacg agccccacga gccgctcacc
121 ccgccgttct cagcgctgcc cgaccccgct ggcgcgccct cccgccgcca gtcccggcag
181 cgccctcagt tgtcctccga ctcgccctcg gccttccgcg ccagccgcag ccacagccgc
241 aacgccaccc gcagccacag ccacagccac agccccaggc atagccttcg gcacagcccc
301 ggctccggct cctgcggcag ctcctctggg caccgtccct gcgccgacat cctggaggtt
361 gggatgctct tgtccaaaat caactcgctt gcccacctgc gcgccgcgcc ctgcaacgac
421 ctgcacgcca ccaagctggc gcccggcaag gagaaggagc ccctggagtc gcagtaccag
481 gtgggcccgc tactgggcag cggcggcttc ggctcggtct actcaggcat ccgcgtctcc
541 gacaacttgc cggtggccat caaacacgtg gagaaggacc ggatttccga ctggggagag
601 ctgcctaatg gcactcgagt gcccatggaa gtggtcctgc tgaagaaggt gagctcgggt
661 ttctccggcg tcattaggct cctggactgg ttcgagaggc ccgacagttt cgtcctgatc
721 ctggagaggc ccgagccggt gcaagatctc ttcgacttca tcacggaaag gggagccctg
781 caagaggagc tggcccgcag cttcttctgg caggtgctgg aggccgtgcg gcactgccac
841 aactgcgggg tgctccaccg cgacatcaag gacgaaaaca tccttatcga cctcaatcgc
901 ggcgagctca agctcatcga cttcgggtcg ggggcgctgc tcaaggacac cgtctacacg
961 gacttcgatg ggacccgagt gtatagccct ccagagtgga tccgctacca tcgctaccat
1021 ggcaggtcgg cggcagtctg gtccctgggg atcctgctgt atgatatggt gtgtggagat
1081 attcctttcg agcatgacga agagatcatc aggggccagg ttttcttcag gcagagggtc
1141 tcttcagaat gtcagcatct cattagatgg tgcttggccc tgagaccatc agataggcca
1201 accttcgaag aaatccagaa ccatccatgg atgcaagatg ttctcctgcc ccaggaaact
1261 gctgagatcc acctccacag cctgtcgccg gggcccagca aatagcagcc tttctggcag
1321 gtcctcccct ctcttgtcag atgcccgagg gaggggaagc ttctgtctcc agcttcccga
1381 gtaccagtga cacgtctcgc caagcaggac agtgcttgat acaggaacaa catttacaac
1441 tcattccaga tcccaggccc ctggaggctg cctcccaaca gtggggaaga gtgactctcc
1501 aggggtccta ggcctcaact cctcccatag atactctctt cttctcatag gtgtccagca
1561 ttgctggact ctgaaatatc ccgggggtgg ggggtggggg tgggtcagaa ccctgccatg
1621 gaactgtttt cttcatcatg agttctgctg aatgccgcga tgggtcaggt aggggggaaa
1681 caggttggga tgggatagga ctagcaccat tttaagtccc tgtcacctct tccgactctt
1741 tctgagtgcc ttctgtgggg actccggctg tgctgggaga aatacttgaa cttgcctctt
1801 ttacctgctg cttctccaaa aatctgcctg ggttttgttc cctatttttc tctcctgtcc
1861 tccctcaccc cctccttcat atgaaaggtg ccatggaaga ggctacaggg ccaaacgctg
1921 agccacctgc ccttttttct gcctccttta gtaaaactcc gagtgaactg gtcttccttt
1981 ttggttttta cttaactgtt tcaaagccaa gacctcacac acacaaaaaa tgcacaaaca
2041 atgcaatcaa cagaaaagct gtaaatgtgt gtacagttgg catggtagta tacaaaaaga
2101 ttgtagtgga tctaattttt aagaaatttt gcctttaagt tattttacct gtttttgttt
2161 cttgttttga aagatgcgca ttctaacctg gaggtcaatg ttatgtattt atttatttat
2221 ttatttggtt cccttcctat tccaagcttc catagctgct gccctagttt tctttcctcc
2281 tttcctcctc tgacttgggg accttttggg ggagggctgc gacgcttgct ctgtttgtgg
2341 ggtgacggga ctcaggcggg acagtgctgc agctccctgg cttctgtggg gcccctcacc
2401 tacttaccca ggtgggtccc ggctctgtgg gtgatgggga ggggcattgc tgactgtgta
2461 tataggataa ttatgaaaag cagttctgga tggtgtgcct tccagatcct ctctggggct
2521 gtgttttgag cagcaggtag cctgctggtt ttatctgagt gaaatactgt acaggggaat
2581 aaaagagatc ttattttttt ttttatactt ggcgtttttt gaataaaaac cttttgtctt
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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