LOCUS BC020209 1721 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 4
(lysophosphatidic acid acyltransferase, delta), mRNA (cDNA clone
MGC:31832 IMAGE:4850399), complete cds.
ACCESSION BC020209
VERSION BC020209.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 69128030.
FEATURES Location/Qualifiers
source 1..1721
/db_xref="H-InvDB:HIT000038751"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31832 IMAGE:4850399"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1721
/gene="AGPAT4"
/gene_synonym="1-AGPAT4"
/gene_synonym="dJ473J16.2"
/gene_synonym="LPAAT-delta"
/gene_synonym="RP3-473J16.2"
/db_xref="GeneID:56895"
/db_xref="HGNC:HGNC:20885"
CDS 160..1296
/gene="AGPAT4"
/gene_synonym="1-AGPAT4"
/gene_synonym="dJ473J16.2"
/gene_synonym="LPAAT-delta"
/gene_synonym="RP3-473J16.2"
/codon_start=1
/product="1-acylglycerol-3-phosphate O-acyltransferase 4
(lysophosphatidic acid acyltransferase, delta)"
/protein_id="AAH20209.1"
/db_xref="GeneID:56895"
/db_xref="HGNC:HGNC:20885"
/translation="MDLAGLLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQ
LFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDF
LCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQ
HLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSL
RNVVSAVYDCTLNFRNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHK
LYQEKDAFQEEYYRTGTFPETPMVPPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGS
SLTLASFILVFFVASVGVRWMIGVTEIDKGSAYGNSDSKQKLND"
BASE COUNT 379 a 429 c 479 g 434 t
ORIGIN
1 tctgaaccca gccggctcca tctcagcttc tggtttctaa gtccatgtgc caaaggctgc
61 caggaaggag acgccttcct gagtcctgga tctttcttcc ttctggaaat ctttgactgt
121 gggtagttat ttatttctga ataagagcgt ccacgcatca tggacctcgc gggactgctg
181 aagtctcagt tcctgtgcca cctggtcttc tgctacgtct ttattgcctc agggctaatc
241 atcaacacca ttcagctctt cactctcctc ctctggccca ttaacaagca gctcttccgg
301 aagatcaact gcagactgtc ctattgcatc tcaagccagc tggtgatgct gctggagtgg
361 tggtcgggca cggaatgcac catcttcacg gacccgcgcg cctacctcaa gtatgggaag
421 gaaaatgcca tcgtggttct caaccacaag tttgaaattg actttctgtg tggctggagc
481 ctgtccgaac gctttgggct gttagggggc tccaaggtcc tggccaagaa agagctggcc
541 tatgtcccaa ttatcggctg gatgtggtac ttcaccgaga tggtcttctg ttcgcgcaag
601 tgggagcagg atcgcaagac ggttgccacc agtttgcagc acctccggga ctaccccgag
661 aagtattttt tcctgattca ctgtgagggc acacggttca cggagaagaa gcatgagatc
721 agcatgcagg tggcccgggc caaggggctg cctcgcctca agcatcacct gttgccacga
781 accaagggct tcgccatcac cgtgaggagc ttgagaaatg tagtttcagc tgtatatgac
841 tgtacactca atttcagaaa taatgaaaat ccaacactgc tgggagtcct aaacggaaag
901 aaataccatg cagatttgta tgttaggagg atcccactgg aagacatccc tgaagacgat
961 gacgagtgct cggcctggct gcacaagctc taccaggaga aggatgcctt tcaggaggag
1021 tactacagga cgggcacctt cccagagacg cccatggtgc ccccccggcg gccctggacc
1081 ctcgtgaact ggctgttttg ggcctcgctg gtgctctacc ctttcttcca gttcctggtc
1141 agcatgatca ggagcgggtc ttccctgacg ctggccagct tcatcctcgt cttctttgtg
1201 gcctctgtgg gagttcgatg gatgattggt gtgacggaaa ttgacaaggg ctctgcctac
1261 ggcaactctg acagcaagca gaaactgaat gactgactca gggaggtgtc accatccgaa
1321 gggaaccttg gggaactggt ggcctctgca tatcctcctt agtgggacac ggtgacaaag
1381 gctgggtgag cccctgctgg gcacggcgga agtcacgacc tctccagcca gggagtctgg
1441 tctcaaggcc ggatggggag gaagatgttt tgtaatcttt ttttccccat gtgctttagt
1501 gggctttggt tttctttttg tgcgagtgtg tgtgagaatg gctgtgtggt gagtgtgaac
1561 tttgttctgt gatcatagaa agggtatttt aggctgcagg ggagggcagg gctggggacc
1621 gaaggggaca agttcccctt tcatcctttg gtgctgagtt ttctgtaacc cttggttgcc
1681 agagataaag tgaaaagtgc tttaaaaaaa aaaaaaaaaa a
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