LOCUS BC019954 3802 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens RNA guanylyltransferase and 5'-phosphatase, mRNA (cDNA
clone MGC:9536 IMAGE:3923156), complete cds.
ACCESSION BC019954
VERSION BC019954.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506562.
FEATURES Location/Qualifiers
source 1..3802
/db_xref="H-InvDB:HIT000038725"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9536 IMAGE:3923156"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3802
/gene="RNGTT"
/gene_synonym="CAP1A"
/gene_synonym="hCAP"
/gene_synonym="HCE"
/gene_synonym="HCE1"
/db_xref="GeneID:8732"
/db_xref="HGNC:HGNC:10073"
/db_xref="MIM:603512"
CDS 188..1981
/gene="RNGTT"
/gene_synonym="CAP1A"
/gene_synonym="hCAP"
/gene_synonym="HCE"
/gene_synonym="HCE1"
/codon_start=1
/product="RNA guanylyltransferase and 5'-phosphatase"
/protein_id="AAH19954.1"
/db_xref="GeneID:8732"
/db_xref="HGNC:HGNC:10073"
/db_xref="MIM:603512"
/translation="MAHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENR
FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTEN
TETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR
PPGIYKGDYLKELFRRYGDIEEAPPPPLLPDWCFEDDEDEDEDEDGKKESETGSSASF
GKRRKERLKLGAIFLEGVTVKGVTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSM
DKQNIKLLDLKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLR
MHLSNTLLDGEMIIDRVNGQAVPRYLIYDIIKFNSQPVGDCDFNVRLQCIEREIISPR
HEKMKTGLIDKTQEPFSVRNKPFFDICTSRKLLEGNFAKEVSHEMDGLIFQPTGKYKP
GRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIKVTKELK
QYDNKIIECKFENNSWVFMRQRTDKSFPNAYNTAMAVCNSISNPVTKEMLFEFIDRCT
AASQGQKRKHHLDPDTELMPPPPPKRPHPLT"
BASE COUNT 1219 a 666 c 813 g 1104 t
ORIGIN
1 tgtggagttg atcctgaatg aaagtggcgc gccgcccctg acgttacccg gatcggagag
61 gttggaattc agattacggc tgcgattcgg gtgtctcgga ccccggtgtg caccggacca
121 cggggaggcg gctccaaagg cgcggtgaac gttggtgagg gagggcagct ctgcgcagcc
181 ccaagacatg gctcacaaca agatcccgcc gcggtggctg aactgtcccc ggcgcggcca
241 gccggtggca ggaagattct tacctctgaa gacaatgtta ggaccaagat atgatagtca
301 agttgctgaa gaaaatcggt tccatcccag catgctctca aattacctaa agagcctaaa
361 ggttaaaatg ggcttgttgg tggacctgac aaatacttca aggttctatg accgaaatga
421 catagaaaaa gaaggaatca aatatataaa acttcagtgt aaaggacatg gtgagtgccc
481 taccactgag aatactgaga cctttattcg tctgtgtgag cggtttaatg aaagaaatcc
541 acctgaactt ataggtgttc attgtactca tggcttcaat cgcactggtt tcctcatatg
601 tgcctttttg gtggagaaaa tggattggag tatcgaagca gcagttgcta cttttgccca
661 agccagacca ccaggaatct acaagggtga ttatttgaag gaactttttc gtcggtatgg
721 tgacatagag gaagcaccac ccccacctct attgccagat tggtgttttg aggatgatga
781 agacgaagat gaggatgagg atggaaagaa ggaatcagaa accgggtcaa gtgcttcttt
841 tggcaaaagg agaaaagaac ggttaaaact gggcgctatt ttcttggaag gtgttactgt
901 taaaggtgta actcaagtaa caacacaacc aaagttagga gaggtacagc agaagtgtca
961 tcaattctgt ggctgggaag ggtctggatt ccctggagca cagcctgttt ccatggacaa
1021 gcaaaatatt aaacttttag acctgaagcc atacaaagta agctggaaag cagatggtac
1081 tcggtacatg atgttgattg atggcacaaa tgaagttttt atgattgata gagacaattc
1141 agtatttcat gtttcaaatc tggaatttcc atttcgtaaa gatcttcgta tgcatttatc
1201 aaatactctc ttggatggcg agatgattat tgacagagta aatggacagg ctgttcctag
1261 atatttgata tatgacataa ttaaattcaa ttcacagccc gttggagatt gtgattttaa
1321 tgttcgtctg cagtgtatag aacgagaaat tataagtcct cgacacgaaa aaatgaagac
1381 tgggctcatt gacaaaacac aggaaccatt tagcgtcaga aataagccgt tttttgacat
1441 ctgtacttca agaaagctac ttgaaggaaa ttttgccaaa gaagtgagcc atgaaatgga
1501 tggacttatt tttcagccta ctggaaaata caaacctggt cgatgtgatg atattttgaa
1561 atggaagcct cccagtctga attctgtgga ttttcgtcta aaaataacaa gaatgggagg
1621 agaagggtta cttcctcaga atgttggcct cctgtatgtt ggaggttatg aaagaccctt
1681 tgcacaaatc aaggtgacaa aagagctgaa acagtatgac aacaaaatta tagaatgcaa
1741 atttgagaac aacagctggg tcttcatgag acagagaaca gacaaaagtt ttcctaatgc
1801 ctacaacact gccatggctg tgtgtaacag catctcaaac cctgtcacca aggagatgct
1861 gtttgagttc atcgacagat gtactgcagc ttctcaagga cagaagcgaa aacatcatct
1921 ggaccctgac acggagctca tgccaccacc acctcccaaa agaccacacc ctttaaccta
1981 agacctgcct gtgacttgag ggttaagaag aaagaggaat gaggaaaaaa cgctgttgcc
2041 catttttgta gccagagaaa ttgaaaaacg actgtggctt gatgttgata cacatttgaa
2101 ttttttttaa aaaaagaaag ttatcgtagc cagcctgtaa atacttgatg cattcgtttc
2161 ctcagtgctg caatacatcg tggacttaaa catcttattt atctgataaa ctcagcctta
2221 ccttgtggaa tctgaagatt gaaatatcca aaggtttaaa caagatggaa atcaatgaaa
2281 aagaggcctt gtttatatat gggtagcttc acatttaatt tataaagtta acaatctgga
2341 aactgtgagc ccataaaaca gtatttttta gaagttgtgt tacaactgta gcaaattttc
2401 cttttaaaaa atccaggcaa tggcattaaa cattcttgct atcatttacc atggatttcc
2461 tacatttctg agatccctgt attcaaaaac aaatgacagg gttgttaagt tgtactatat
2521 taaacaactt ggtctggttt atatcatttt aacaagtttt ttggaaatgt aaaagaaaaa
2581 agtaaagctc catttttgtg aattgcattg tttctaaagg aagtattttg agtattttca
2641 tctgtttgta ttgtttcgac tatgatatca gatatccagt gtgtccattc tggcagtggt
2701 tttgagttac ttcatggaac ttggacatac accaccaggt cctttatgtg ttgttctcct
2761 gggagacttc tttttttaaa tgccagggct acttctgctt tacctcagtg gtatcagcac
2821 attgtaaatt acgttaaaac acacaactca ctgtgatcta tgggagtgat atcaaataca
2881 aacgatgttg tgttccttct ctcgaacaaa acagcaaagg gaatgccagc taacttcttt
2941 gattagaagg taatgtcatg gaatagaatg ctgtcaccag aaaatgctct cccactgcta
3001 gataaatgca gaggcaaagt gtagacatct gtaggaacta aatatcaagg aaatcaagac
3061 atttattttc aaagcgagaa ttctatctac attctattct gcggatgtta tttctgttac
3121 acatctgaat tttaaaatgt ttactgatag ataatggatt taaagggcgg ctaattgatt
3181 gtctgccatt gttgataaac tgttctaatt ggtttgtgaa agaactctga gaattagcta
3241 aatggaggct agtgtattta tttttagagg tacatgtttt aagtaaatgt atttaaaaca
3301 aattttcatg gtctgaattg tatatgtaaa tgcatatctg tgtaagtata tgcaagtgta
3361 tattcttcta ctgattcagt cagacacgaa atccaactga attacccggt agactgaata
3421 tctgacggga tttctatatg gacatagcac agatgaacca aaaatgtatt tatattcacc
3481 tgagttttaa tgtttttaaa caaagttttc tcctgcagtg cttttctata tgaaatagtt
3541 gagtcaagct tgggcttttt tcttcgttgt tcccaagtca tgtaatgtat agtgaattta
3601 tccaaaacgc cattgtaacg ttttttacta gagtgttttt gcacatttgg gcgctaaagg
3661 gattaaaaca actgatgcca caatgactat tgaaggaggg aaaattctca aggttccata
3721 gtatctttta caaaatggat taaaaaaaaa tgcctatgca aaaaaaaaaa aaaaaaaaaa
3781 aaaaaaaaaa aaaaaaaaaa aa
//