LOCUS BC019350 1682 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens GATA zinc finger domain containing 1, mRNA (cDNA clone
MGC:13048 IMAGE:3626609), complete cds.
ACCESSION BC019350
VERSION BC019350.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24432038.
FEATURES Location/Qualifiers
source 1..1682
/db_xref="H-InvDB:HIT000038655"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13048 IMAGE:3626609"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1682
/gene="GATAD1"
/gene_synonym="FLJ22489"
/gene_synonym="ODAG"
/gene_synonym="RG083M05.2"
/db_xref="GeneID:57798"
/db_xref="HGNC:HGNC:29941"
CDS 254..1063
/gene="GATAD1"
/gene_synonym="FLJ22489"
/gene_synonym="ODAG"
/gene_synonym="RG083M05.2"
/codon_start=1
/product="GATA zinc finger domain containing 1"
/protein_id="AAH19350.1"
/db_xref="GeneID:57798"
/db_xref="HGNC:HGNC:29941"
/translation="MPLGLKPTCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGA
GSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLRNTKYKS
APAAEKKVSTKGKGRRHIFKLKNPIKAPESVSTIITAESIFYKGVYYQIGDVVSVIDE
QDGKPYYAQIRGFIQDQYCEKSAALTWLIPTLSSPRDQFDPASYIIGPEEDLPRKMEY
LEFVCHAPSEYFKSRSSPFPTVPTRPEKGYIWTHVGPTPAITIKESVANHL"
BASE COUNT 425 a 449 c 450 g 358 t
ORIGIN
1 gatccctttc ccagtcctgc ttcccagtgc ctcgggccag ggaatcctgg cctccgcctg
61 cggagccggc ggaacccgct tcccgcctcc acggggcagc gccagcggcc tggtcctttc
121 accggcagct ccgtgccgac gctctcaccg ctcttcctat cgccgggagt ggcgggccga
181 ccagggggcg gccgggctac cgtccgccat tcccgtgtct ctgcgcccgc gggggccgcc
241 cgagccggcc accatgccgc tgggcctgaa gcccacctgc agcgtatgca agaccacgtc
301 gtcctccatg tggaagaagg gagcgcaggg ggagatcctc tgccatcatt gcactggccg
361 gggcggcgcg ggcagcgggg gcgcaggctc gggggcggct ggagggactg ggggcagcgg
421 cggcggcggc ttcggcgcgg cgaccttcgc cagcacctcc gccacccctc cgcagagcaa
481 cgggggcggg ggcggcaagc agagtaagca ggaaattcac aggaggtctg ctcggctcag
541 aaacactaaa tacaaatctg ctccggctgc tgaaaagaaa gtctccacca aaggaaaagg
601 gagaagacat atatttaaat tgaaaaatcc catcaaagct cctgagtcag tttccactat
661 aatcactgca gaatcaatct tctacaaggg agtatattac caaattggtg atgttgtttc
721 tgtgattgat gaacaagatg gaaagcccta ctatgctcaa atcagaggtt ttatccagga
781 ccagtattgc gagaagagtg cagcactgac gtggctcatt cctaccctct ctagccccag
841 agaccaattt gatcccgcct cctatatcat agggccagag gaagatcttc caaggaagat
901 ggaatacttg gaatttgttt gtcatgcacc ttctgagtat ttcaagtcac ggtcatcacc
961 atttcccaca gttcccacca gaccagagaa gggctacata tggactcatg ttgggcctac
1021 tcctgcaata acaattaagg aatcagttgc caaccatttg tagttcacaa attaaaactg
1081 ggtttccagg cctggtgtgg tggctcacgc ctgtagcccc agctattgca ccactgctct
1141 ccaagctggg caatggagtc agattctctt tcttaaaaaa ccacaaaaaa actggatttc
1201 cagttctcta atattcttag taccacaaga tatgtcatag gtatctttaa atgaaattct
1261 tagctggaaa agtgactaaa aagtttttct cctgctacct agtaataaac aaatcattgt
1321 ttattactgg tcacttagaa aattaaaagg gatagggcca ggcacagtgg cttatgcctg
1381 taattgcagc acttttagag gccgaggcag gcggatcacc tgaggtcggg aagtggatcg
1441 cctgaggtca ggagttcgag accagcctgg ccaacatggc gaaaccccgt cgctactaaa
1501 aatacaaaaa ttagccaggt gtggtggcat gtgcctgtaa tcccagctat ttgggaggct
1561 gaggcaggag aatcgcctaa acccaggagg tggaggttgt agtgagccaa gattgcaccg
1621 ctgtgctcca gcctgggcaa cagagtgaga ctcttgtctc ggaaaaaaaa aaaaaaaaaa
1681 aa
//